RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CPSF3Q9UKF6 684 aaKnown RBP18.87■□□□□ 0.61
SSBP4-207ENST00000600244 USP9XQ93008 2570 aaPredicted RBP18.87■□□□□ 0.61
SSBP4-207ENST00000600244 KPNA7A9QM74 516 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 BCAT2O15382 392 aaPredicted RBP18.86■□□□□ 0.61
SSBP4-207ENST00000600244 TULP3O75386 442 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 OR52Z1P0C646 297 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 CD6P30203 668 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 RTP5Q14D33 572 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 CFAP221Q4G0U5 840 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 DIS3L2Q8IYB7 885 aaKnown RBP18.86■□□□□ 0.61
SSBP4-207ENST00000600244 CADM4Q8NFZ8 388 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 WASF1Q92558 559 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 KCNN1Q92952 543 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 GABRG3Q99928 467 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 SLC6A17Q9H1V8 727 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 WSB2Q9NYS7 404 aaPredicted RBP18.86■□□□□ 0.61
SSBP4-207ENST00000600244 GTF3C4Q9UKN8 822 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 CPQQ9Y646 472 aa18.86■□□□□ 0.61
SSBP4-207ENST00000600244 PLS3P13797 630 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 SMTNP53814 917 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 GAD2Q05329 585 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 TAF1BQ53T94 588 aaPredicted RBP18.85■□□□□ 0.61
SSBP4-207ENST00000600244 CCDC157Q569K6 752 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 INTS6LQ5JSJ4 861 aaKnown RBP18.85■□□□□ 0.61
SSBP4-207ENST00000600244 C10orf76Q5T2E6 689 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 C6orf118Q5T5N4 469 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 EGFLAMQ63HQ2 1017 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 METTL3Q86U44 580 aaKnown RBP18.85■□□□□ 0.61
SSBP4-207ENST00000600244 FMNL3Q8IVF7 1028 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 NAT16Q8N8M0 369 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 TERB1Q8NA31 727 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 NSUN7Q8NE18 718 aaKnown RBP18.85■□□□□ 0.61
SSBP4-207ENST00000600244 TOE1Q96GM8 510 aaKnown RBP18.85■□□□□ 0.61
SSBP4-207ENST00000600244 MIR1-1HGQ9H1L0 117 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 GMIPQ9P107 970 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 CFAP97Q9P2B7 532 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 DEC1Q9P2X7 70 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 DNM3Q9UQ16 869 aa18.85■□□□□ 0.61
SSBP4-207ENST00000600244 METTL12A8MUP2 240 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 MEI4A8MW99 385 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 HOXC11O43248 304 aaPredicted RBP18.84■□□□□ 0.61
SSBP4-207ENST00000600244 NCAM1P13591 858 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 GUCY2CP25092 1073 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 GRK6P43250 576 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 CXADRP78310 365 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 CUL4AQ13619 759 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 CCDC142Q17RM4 750 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 PREPLQ4J6C6 727 aaPredicted RBP18.84■□□□□ 0.61
SSBP4-207ENST00000600244 SCN4BQ8IWT1 228 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 PDCL2Q8N4E4 241 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 ERLEC1Q96DZ1 483 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 LLPHQ9BRT6 129 aaKnown RBP18.84■□□□□ 0.61
SSBP4-207ENST00000600244 TIPINQ9BVW5 301 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 NRSN2Q9GZP1 204 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 SMPD4Q9NXE4 827 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 DPP3Q9NY33 737 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 TRPM5Q9NZQ8 1165 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 TBC1D14Q9P2M4 693 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 C2CD2Q9Y426 696 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 AK5Q9Y6K8 562 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 TCHHQ07283 1943 aa18.84■□□□□ 0.61
SSBP4-207ENST00000600244 COL5A1P20908 1838 aaPredicted RBP18.84■□□□□ 0.61
SSBP4-207ENST00000600244 A0A0B4J269 797 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 A0A1B0GVT2 93 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 ZNF840PA6NDX5 716 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 TRIM24O15164 1050 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 JUPP14923 745 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 ACAT1P24752 427 aaKnown RBP18.83■□□□□ 0.6
SSBP4-207ENST00000600244 MAGEA11P43364 429 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 FXR2P51116 673 aaKnown RBP eCLIP18.83■□□□□ 0.6
SSBP4-207ENST00000600244 USP46P62068 366 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 SDE2Q6IQ49 451 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 NUDT18Q6ZVK8 323 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 CCDC83Q8IWF9 413 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 CHPFQ8IZ52 775 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 FGF11Q92914 225 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 BICD1Q96G01 975 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 FUBP3Q96I24 572 aaKnown RBP eCLIP18.83■□□□□ 0.6
SSBP4-207ENST00000600244 SPATA17Q96L03 361 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 GPR174Q9BXC1 333 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 ASB7Q9H672 318 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 DDX43Q9NXZ2 648 aaKnown RBP18.83■□□□□ 0.6
SSBP4-207ENST00000600244 LRWD1Q9UFC0 647 aa18.83■□□□□ 0.6
SSBP4-207ENST00000600244 OAS1P00973 400 aaKnown RBP18.82■□□□□ 0.6
SSBP4-207ENST00000600244 PIGRP01833 764 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 C6P13671 934 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 RHDQ02161 417 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 ZNF174Q15697 407 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 SV2CQ496J9 727 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 PKDCCQ504Y2 493 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 DCAF12L1Q5VU92 463 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 SPACA3Q8IXA5 215 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 OTUB2Q96DC9 234 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 TTLL2Q9BWV7 592 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 ITM2CQ9NQX7 267 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 USP36Q9P275 1121 aaKnown RBP18.82■□□□□ 0.6
SSBP4-207ENST00000600244 L1RE1Q9UN81 338 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 PCDHGA1Q9Y5H4 931 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 RAD54BQ9Y620 910 aa18.82■□□□□ 0.6
SSBP4-207ENST00000600244 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms