RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 CLEC4CQ8WTT0 213 aa22.6■■□□□ 1.21
GRAMD1A-212ENST00000600231 STK32AQ8WU08 396 aa22.6■■□□□ 1.21
GRAMD1A-212ENST00000600231 RNF157Q96PX1 679 aa22.6■■□□□ 1.21
GRAMD1A-212ENST00000600231 CCDC134Q9H6E4 229 aa22.6■■□□□ 1.21
GRAMD1A-212ENST00000600231 KCNK9Q9NPC2 374 aa22.6■■□□□ 1.21
GRAMD1A-212ENST00000600231 IPPQ9Y573 584 aa22.6■■□□□ 1.21
GRAMD1A-212ENST00000600231 NDC80O14777 642 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 BRAFP15056 766 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 TFE3P19532 575 aaPredicted RBP22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 GCAP28676 217 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 KRT81Q14533 505 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 BOLA3Q53S33 107 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 GKAP1Q5VSY0 366 aaPredicted RBP22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 CRYBG2Q8N1P7 616 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 P3H4Q92791 437 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 VPS37BQ9H9H4 285 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 GDAP2Q9NXN4 497 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 ATXN2Q99700 1313 aaKnown RBP22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 TCRBV7S3A2A0A539 114 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 KIAA0754O94854 1291 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 MAGEA9P43362 315 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 NOMO1Q15155 1222 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 FSCN1Q16658 493 aaKnown RBP22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 FAM182AQ5T1J6 154 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 ANKMY2Q8IV38 441 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 SRRM1Q8IYB3 904 aaKnown RBP22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 ANKRD52Q8NB46 1076 aa22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 SMG8Q8ND04 991 aaKnown RBP22.59■■□□□ 1.21
GRAMD1A-212ENST00000600231 TFDP2Q14188 446 aa22.58■■□□□ 1.21
GRAMD1A-212ENST00000600231 CA9Q16790 459 aa22.58■■□□□ 1.21
GRAMD1A-212ENST00000600231 MSS51Q4VC12 460 aa22.58■■□□□ 1.21
GRAMD1A-212ENST00000600231 FNBP1LQ5T0N5 605 aa22.58■■□□□ 1.21
GRAMD1A-212ENST00000600231 C1orf228Q6PIY5 440 aa22.58■■□□□ 1.21
GRAMD1A-212ENST00000600231 MAP7D3Q8IWC1 876 aa22.58■■□□□ 1.21
GRAMD1A-212ENST00000600231 LRRC34Q8IZ02 419 aa22.58■■□□□ 1.21
GRAMD1A-212ENST00000600231 MAML1Q92585 1016 aa22.58■■□□□ 1.21
GRAMD1A-212ENST00000600231 ZNF560Q96MR9 790 aa22.58■■□□□ 1.21
GRAMD1A-212ENST00000600231 MLXIPLQ9NP71 852 aa22.58■■□□□ 1.21
GRAMD1A-212ENST00000600231 RGS2P41220 211 aa22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 TAF6P49848 677 aa22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 HDAC4P56524 1084 aa22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 PURAQ00577 322 aaKnown RBP22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 ADCY1Q08828 1119 aa22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 BST2Q10589 180 aaKnown RBP22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 MTM1Q13496 603 aa22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 DARS2Q6PI48 645 aaKnown RBP22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 CACNA2D3Q8IZS8 1091 aa22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 OTUD6BQ8N6M0 293 aa22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 ANKRD42Q8N9B4 389 aa22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 CABS1Q96KC9 395 aa22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 SNRNP25Q9BV90 132 aaKnown RBP22.58■■□□□ 1.2
GRAMD1A-212ENST00000600231 MANSC4A6NHS7 340 aaPredicted RBP22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 POC1B-GALNT4F8VUJ3 575 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 XPOTO43592 962 aaKnown RBP22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 ROR1Q01973 937 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 PDK2Q15119 407 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 TMED2Q15363 201 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 FAM47CQ5HY64 1035 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 YTHDF3Q7Z739 585 aaKnown RBP22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 ZDHHC17Q8IUH5 632 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 PLD5Q8N7P1 536 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 APPL2Q8NEU8 664 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 KATNAL1Q9BW62 490 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 SNX25Q9H3E2 840 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 PCDH18Q9HCL0 1135 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 Q9Y3F1 56 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 TMEM63AO94886 807 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 PNPLA4P41247 253 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 LIG3P49916 1009 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 BCAT1P54687 386 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 SNX16P57768 344 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 TWF2Q6IBS0 349 aaKnown RBP22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 SLC2A14Q8TDB8 520 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 DYDC1Q8WWB3 177 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 ADAM33Q9BZ11 813 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 RASSF4Q9H2L5 321 aa22.57■■□□□ 1.2
GRAMD1A-212ENST00000600231 RASA4BC9J798 803 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 RASA4O43374 803 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 LCP1P13796 627 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 STIP1P31948 543 aaKnown RBP22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 GPX6P59796 221 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 LILRA4P59901 499 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 BASP1P80723 227 aaKnown RBP22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 NME8Q8N427 588 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 RIBC1Q8N443 379 aaPredicted RBP22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 PQLC3Q8N755 202 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 TEKT4Q8WW24 435 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 MYADML2A6NDP7 307 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 VIMP08670 466 aaKnown RBP22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 HOXC8P31273 242 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 ATXN1P54253 815 aaKnown RBP22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 ARL4CP56559 192 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 SF3A3Q12874 501 aaKnown RBP eCLIP22.56■■□□□ 1.25e-7■■■■□ 25.4
GRAMD1A-212ENST00000600231 ANKRD20A8PQ5CZ79 823 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 RNF187Q5TA31 235 aaPredicted RBP22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 TADA2BQ86TJ2 420 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 FAM228AQ86W67 206 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 PCDH19Q8TAB3 1148 aa22.56■■□□□ 1.2
GRAMD1A-212ENST00000600231 TBCBQ99426 244 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms