RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TANGO2Q6ICL3 276 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 RNF135Q8IUD6 432 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 GPIHBP1Q8IV16 184 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 STK32AQ8WU08 396 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 RSAD2Q8WXG1 361 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 OVCA2Q8WZ82 227 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 NDRG1Q92597 394 aaKnown RBP14.49□□□□□ -0.09
VRK3-219ENST00000600137 HSFY1Q96LI6 401 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 CYP2S1Q96SQ9 504 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 SYT11Q9BT88 431 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 COL25A1Q9BXS0 654 aaPredicted RBP14.49□□□□□ -0.09
VRK3-219ENST00000600137 SLC4A5Q9BY07 1137 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 PLA2G2FQ9BZM2 168 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 RNF38Q9H0F5 515 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 LHX5Q9H2C1 402 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 KCNK12Q9HB15 430 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 GMIPQ9P107 970 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 MYO6Q9UM54 1294 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 NUP210Q8TEM1 1887 aaPredicted RBP14.48□□□□□ -0.09
VRK3-219ENST00000600137 CUL9Q8IWT3 2517 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 MED7O43513 233 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 OLFM2O95897 454 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 OAS1P00973 400 aaKnown RBP14.48□□□□□ -0.09
VRK3-219ENST00000600137 ASGR2P07307 311 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 CDH5P33151 784 aaPredicted RBP14.48□□□□□ -0.09
VRK3-219ENST00000600137 PPP3CCP48454 512 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 RGS7P49802 495 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 TKTL1P51854 596 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 IFRD2Q12894 506 aaPredicted RBP14.48□□□□□ -0.09
VRK3-219ENST00000600137 CCDC186Q7Z3E2 898 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 TMEM110Q86TL2 294 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 ARID3BQ8IVW6 561 aaPredicted RBP14.48□□□□□ -0.09
VRK3-219ENST00000600137 SCML4Q8N228 414 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 MAB21L3Q8N8X9 362 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 RIN3Q8TB24 985 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 ZSCAN18Q8TBC5 510 aaPredicted RBP14.48□□□□□ -0.09
VRK3-219ENST00000600137 SLC20A1Q8WUM9 679 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 FBXO32Q969P5 355 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 SPAG5Q96R06 1193 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 ULBP1Q9BZM6 244 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 FBXO44Q9H4M3 255 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 EHD2Q9NZN4 543 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 AIPL1Q9NZN9 384 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 TRPM5Q9NZQ8 1165 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 TJP2Q9UDY2 1190 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 MYO16Q9Y6X6 1858 aa14.48□□□□□ -0.09
VRK3-219ENST00000600137 ITIH6Q6UXX5 1313 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 LRRC53A6NM62 1247 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 PRAMEF12O95522 483 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 GYPCP04921 128 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 MMEP08473 750 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 USP17L7P0C7H9 530 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 VIPR2P41587 438 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 FMO1Q01740 532 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 VSTM4Q8IW00 320 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 CMTM8Q8IZV2 173 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 SLC44A3Q8N4M1 653 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 ZNF276Q8N554 614 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 MRPS31Q92665 395 aaKnown RBP14.47□□□□□ -0.09
VRK3-219ENST00000600137 SMARCD2Q92925 531 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 SLITRK1Q96PX8 696 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 PCDHB18PQ96TA0 734 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 CAPN11Q9UMQ6 739 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 NUMBLQ9Y6R0 609 aa14.47□□□□□ -0.09
VRK3-219ENST00000600137 A0A1W2PQH9 124 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 A0A1W2PQJ5 194 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 PIK3R2O00459 728 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 ZBED1O96006 694 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 CYP1A1P04798 512 aaPredicted RBP14.46□□□□□ -0.09
VRK3-219ENST00000600137 DDX6P26196 483 aaKnown RBP eCLIP14.46□□□□□ -0.09
VRK3-219ENST00000600137 DAOAP59103 153 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 CDR2Q01850 454 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 ADIGQ0VDE8 80 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 TAF3Q5VWG9 929 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 HFE2Q6ZVN8 426 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 CACNA2D4Q7Z3S7 1137 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 PASD1Q8IV76 773 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 ARL14EPQ8N8R7 260 aaPredicted RBP14.46□□□□□ -0.09
VRK3-219ENST00000600137 PDZD8Q8NEN9 1154 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 CLEC4CQ8WTT0 213 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 USP13Q92995 863 aaPredicted RBP14.46□□□□□ -0.09
VRK3-219ENST00000600137 NXPE3Q969Y0 559 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 CPXM1Q96SM3 734 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 NUP58Q9BVL2 599 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 SMG9Q9H0W8 520 aaKnown RBP14.46□□□□□ -0.09
VRK3-219ENST00000600137 SMOC2Q9H3U7 446 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 CCSER2Q9H7U1 834 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 CYLDQ9NQC7 956 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 CNGB3Q9NQW8 809 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.46□□□□□ -0.09
VRK3-219ENST00000600137 IGSF9Q9P2J2 1179 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 ZMYM5Q9UJ78 669 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 CCL26Q9Y258 94 aa14.46□□□□□ -0.09
VRK3-219ENST00000600137 YJEFN3A6XGL0 299 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 E7ENQ6 273 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 PAPSS1O43252 624 aaPredicted RBP14.45□□□□□ -0.1
VRK3-219ENST00000600137 COCHO43405 550 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 CBFA2T2O43439 604 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 ECI2O75521 394 aa14.45□□□□□ -0.1
VRK3-219ENST00000600137 TBX18O95935 607 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms