RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 SIX6OS1Q8N1H7 587 aa17.44■□□□□ 0.38
SHKBP1-219ENST00000599575 SCAMP5Q8TAC9 235 aa17.44■□□□□ 0.38
SHKBP1-219ENST00000599575 ITFG1Q8TB96 612 aa17.44■□□□□ 0.38
SHKBP1-219ENST00000599575 SLC4A5Q9BY07 1137 aa17.44■□□□□ 0.38
SHKBP1-219ENST00000599575 TRPV4Q9HBA0 871 aa17.44■□□□□ 0.38
SHKBP1-219ENST00000599575 ACP6Q9NPH0 428 aa17.44■□□□□ 0.38
SHKBP1-219ENST00000599575 CLIC5Q9NZA1 410 aa17.44■□□□□ 0.38
SHKBP1-219ENST00000599575 HNRNPH3P31942 346 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 ZNF75DP51815 510 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 TKTL1P51854 596 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 ARID5BQ14865 1188 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 ASIC2Q16515 512 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 TSR1Q2NL82 804 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 PMF1Q6P1K2 205 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 DENND1BQ6P3S1 775 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 ZDHHC17Q8IUH5 632 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 CNGA4Q8IV77 575 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 KIAA1958Q8N8K9 716 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 TCEAL4Q96EI5 215 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 IGSF9Q9P2J2 1179 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 CDH22Q9UJ99 828 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 UNC80Q8N2C7 3258 aa17.43■□□□□ 0.38
SHKBP1-219ENST00000599575 CEBPBP17676 345 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 PDCLQ13371 301 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 TEAD2Q15562 447 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 KLHDC10Q6PID8 442 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 BEND5Q7L4P6 421 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 GPRIN1Q7Z2K8 1008 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 VPS36Q86VN1 386 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 OR8K1Q8NGG5 319 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 FEZF2Q8TBJ5 459 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 IPO4Q8TEX9 1081 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 SMARCD2Q92925 531 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 RPGRIP1Q96KN7 1286 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 MYADMQ96S97 322 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 SLITRK6Q9H5Y7 841 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 KIF9Q9HAQ2 790 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 OBP2AQ9NY56 170 aa17.42■□□□□ 0.38
SHKBP1-219ENST00000599575 TRAV19A0A0A6YYK7 116 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 TULP2O00295 520 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 TADA3O75528 432 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 CYP1A1P04798 512 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 CASP14P31944 242 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 AVPR1AP37288 418 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 ARID5AQ03989 594 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 KLHL30Q0D2K2 578 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 ADIGQ0VDE8 80 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 ZNF268Q14587 947 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 PTPN21Q16825 1174 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 HECTD3Q5T447 861 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 GPR158Q5T848 1215 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 CMTM8Q8IZV2 173 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 WDTC1Q8N5D0 677 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 C1orf131Q8NDD1 294 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 GOLGA1Q92805 767 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 PPP1R13BQ96KQ4 1090 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 ASB16Q96NS5 453 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 DNAJC7Q99615 494 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 AGPAT1Q99943 283 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 ST7Q9NRC1 585 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 TMEM51Q9NW97 253 aa17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 ZNHIT6Q9NWK9 470 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-219ENST00000599575 C2CD4DB7Z1M9 353 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 ANHXE9PGG2 379 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 AP5Z1O43299 807 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 OLFM2O95897 454 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 CALCAP01258 141 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 SERPING1P05155 500 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 GLI1P08151 1106 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 MMEP08473 750 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 USP17L7P0C7H9 530 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 RALAP11233 206 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 CDC25BP30305 580 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 SCNN1AP37088 669 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 GABRB2P47870 512 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 FMO1Q01740 532 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 IFRD2Q12894 506 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 TBX2Q13207 712 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 TAF3Q5VWG9 929 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 CPLX3Q8WVH0 158 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 MCRS1Q96EZ8 462 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 SYT11Q9BT88 431 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 SLC46A2Q9BY10 475 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 ULBP1Q9BZM6 244 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 ASNSD1Q9NWL6 643 aa17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 CHORDC1Q9UHD1 332 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-219ENST00000599575 DENND4AQ7Z401 1863 aa17.39■□□□□ 0.38
SHKBP1-219ENST00000599575 ECI2O75521 394 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 OAS1P00973 400 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 CFHP08603 1231 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 GZMAP12544 262 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 TCF3P15923 654 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 CHRNB2P17787 502 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 HDCP19113 662 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 DAOAP59103 153 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 NOMO3P69849 1222 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 SLC7A9P82251 487 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 CENPCQ03188 943 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 TXNDC8Q6A555 127 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 TOGARAM2Q6ZUX3 1019 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms