RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CHURC1-FNTBB4DL54 471 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 SLC16A3O15427 465 aaKnown RBP15.95■□□□□ 0.14
LIG1-215ENST00000597901 COCHO43405 550 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 ATG13O75143 517 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 NFATC1O95644 943 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 FAM200BP0CF97 657 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 CD44P16070 742 aaKnown RBP15.95■□□□□ 0.14
LIG1-215ENST00000597901 FNTBP49356 437 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 PGFP49763 221 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 MXI1P50539 228 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 LRRC63Q05C16 580 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 DMWDQ09019 674 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 TCERG1LQ5VWI1 586 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 PKN3Q6P5Z2 889 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 FILIP1Q7Z7B0 1213 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 CD101Q93033 1021 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 HEXIM2Q96MH2 286 aaKnown RBP15.95■□□□□ 0.14
LIG1-215ENST00000597901 DNAI2Q9GZS0 605 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 EPC1Q9H2F5 836 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 FBXO44Q9H4M3 255 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 GMIPQ9P107 970 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 CFAP97Q9P2B7 532 aa15.95■□□□□ 0.14
LIG1-215ENST00000597901 USP34Q70CQ2 3546 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 TRIM49BA6NDI0 452 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 HHLA1C9JL84 531 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 SLC9A3R1O14745 358 aaPredicted RBP15.94■□□□□ 0.14
LIG1-215ENST00000597901 HRO43593 1189 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 HOXA6P31267 233 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 HOXC13P31276 330 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 STIM1Q13586 685 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 CBWD6Q4V339 395 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 ZNF394Q53GI3 561 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 CBWD3Q5JTY5 395 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 CBWD5Q5RIA9 395 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 CLEC20AQ6ZU45 233 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 TTC39CQ8N584 583 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 CCSER2Q9H7U1 834 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 NCDNQ9UBB6 729 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 ARMCX3Q9UH62 379 aaPredicted RBP15.94■□□□□ 0.14
LIG1-215ENST00000597901 CIZ1Q9ULV3 898 aaPredicted RBP15.94■□□□□ 0.14
LIG1-215ENST00000597901 COQ4Q9Y3A0 265 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 NUP210Q8TEM1 1887 aaPredicted RBP15.94■□□□□ 0.14
LIG1-215ENST00000597901 MIA3Q5JRA6 1907 aa15.94■□□□□ 0.14
LIG1-215ENST00000597901 PPP1R3GB7ZBB8 358 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 PSMA7O14818 248 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 SCAMP3O14828 347 aaKnown RBP15.93■□□□□ 0.14
LIG1-215ENST00000597901 RNF40O75150 1001 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 BMP6P22004 513 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 TUBP50607 506 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 DHCR24Q15392 516 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 FBXO43Q4G163 708 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 DCAF17Q5H9S7 520 aaPredicted RBP15.93■□□□□ 0.14
LIG1-215ENST00000597901 PPP1R26Q5T8A7 1209 aaPredicted RBP15.93■□□□□ 0.14
LIG1-215ENST00000597901 HEATR6Q6AI08 1181 aaKnown RBP15.93■□□□□ 0.14
LIG1-215ENST00000597901 RHBDF2Q6PJF5 856 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 LONP2Q86WA8 852 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 DDX42Q86XP3 938 aaKnown RBP eCLIP15.93■□□□□ 0.14
LIG1-215ENST00000597901 KIAA2013Q8IYS2 634 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 EZH1Q92800 747 aaPredicted RBP15.93■□□□□ 0.14
LIG1-215ENST00000597901 TMEM176AQ96HP8 235 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 ZFRQ96KR1 1074 aaKnown RBP15.93■□□□□ 0.14
LIG1-215ENST00000597901 DUSP16Q9BY84 665 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 TLR8Q9NR97 1041 aaKnown RBP15.93■□□□□ 0.14
LIG1-215ENST00000597901 CISHQ9NSE2 258 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 SCML2Q9UQR0 700 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 MYO15AQ9UKN7 3530 aa15.93■□□□□ 0.14
LIG1-215ENST00000597901 E2F8A0AVK6 867 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 TBX18O95935 607 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 ACO1P21399 889 aaKnown RBP15.92■□□□□ 0.14
LIG1-215ENST00000597901 CNR2P34972 360 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 OPRD1P41143 372 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 PPP1R2P41236 205 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 RAD23BP54727 409 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 MORC3Q14149 939 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 GAB4Q2WGN9 574 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 ERMP1Q7Z2K6 904 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 GPRIN1Q7Z2K8 1008 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 SLC4A11Q8NBS3 891 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 SLC35C1Q96A29 364 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 JAKMIP2Q96AA8 810 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 DUSP9Q99956 384 aaKnown RBP15.92■□□□□ 0.14
LIG1-215ENST00000597901 METTL14Q9HCE5 456 aaKnown RBP15.92■□□□□ 0.14
LIG1-215ENST00000597901 POLR3BQ9NW08 1133 aaPredicted RBP15.92■□□□□ 0.14
LIG1-215ENST00000597901 TBC1D14Q9P2M4 693 aa15.92■□□□□ 0.14
LIG1-215ENST00000597901 SMG5Q9UPR3 1016 aaKnown RBP15.92■□□□□ 0.14
LIG1-215ENST00000597901 DMDP11532 3685 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 CYP17A1P05093 508 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 SLC6A11P48066 632 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 KIF11P52732 1056 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 KLHL10Q6JEL2 608 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 GPR161Q8N6U8 529 aaKnown RBP15.91■□□□□ 0.14
LIG1-215ENST00000597901 WBP2Q969T9 261 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 CEP63Q96MT8 703 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 ARID3AQ99856 593 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 UBXN6Q9BZV1 441 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 NACA2Q9H009 215 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 FAM124BQ9H5Z6 455 aaPredicted RBP15.91■□□□□ 0.14
LIG1-215ENST00000597901 PNPLA8Q9NP80 782 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 OSER1Q9NX31 292 aa15.91■□□□□ 0.14
LIG1-215ENST00000597901 RAB23Q9ULC3 237 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms