RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TNFRSF10BO14763 440 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 GADD45BO75293 160 aaPredicted RBP16.08■□□□□ 0.16
TGFB1-202ENST00000597453 CCDC192P0DO97 292 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 MBL2P11226 248 aaPredicted RBP16.08■□□□□ 0.16
TGFB1-202ENST00000597453 UBE2HP62256 183 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 DMC1Q14565 340 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 CCDC6Q16204 474 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 CEP135Q66GS9 1140 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 SPOPLQ6IQ16 392 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 CLEC17AQ6ZS10 378 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 SV2AQ7L0J3 742 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 CACNA2D4Q7Z3S7 1137 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 ACOT1Q86TX2 421 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 ELOA2Q8IYF1 753 aaPredicted RBP16.08■□□□□ 0.16
TGFB1-202ENST00000597453 ADGRG2Q8IZP9 1017 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 FUKQ8N0W3 1084 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 NETO1Q8TDF5 533 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 FBXO32Q969P5 355 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 RTKNQ9BST9 563 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 ARRDC1-AS1Q9H2J1 176 aa16.08■□□□□ 0.16
TGFB1-202ENST00000597453 CHORDC1Q9UHD1 332 aaPredicted RBP16.08■□□□□ 0.16
TGFB1-202ENST00000597453 HOOK1Q9UJC3 728 aaKnown RBP16.08■□□□□ 0.16
TGFB1-202ENST00000597453 TPRP12270 2363 aaKnown RBP16.08■□□□□ 0.16
TGFB1-202ENST00000597453 COCHO43405 550 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 BEST1O76090 585 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 RTN3O95197 1032 aaPredicted RBP16.07■□□□□ 0.16
TGFB1-202ENST00000597453 EPN2O95208 641 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 KIF20AO95235 890 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 CCDC130P13994 396 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 ASPAP45381 313 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 SLC6A11P48066 632 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 NDST1P52848 882 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 SLC5A3P53794 718 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 SEC13P55735 322 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 MESP2Q0VG99 397 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 PNOCQ13519 176 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 DHCR24Q15392 516 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 SFTPA1Q8IWL2 248 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 ZMIZ2Q8NF64 920 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 TMC2Q8TDI7 906 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 USP33Q8TEY7 942 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 ACDQ96AP0 544 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 SMARCD1Q96GM5 515 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 TNIP3Q96KP6 325 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 ZFRQ96KR1 1074 aaKnown RBP16.07■□□□□ 0.16
TGFB1-202ENST00000597453 DMAP1Q9NPF5 467 aaPredicted RBP16.07■□□□□ 0.16
TGFB1-202ENST00000597453 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.07■□□□□ 0.162e-8■■■■■ 67.3
TGFB1-202ENST00000597453 KRT82Q9NSB4 513 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 IL37Q9NZH6 218 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 TRAF3IP3Q9Y228 551 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 ATP8B3O60423 1300 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 ABCA7Q8IZY2 2146 aa16.07■□□□□ 0.16
TGFB1-202ENST00000597453 MYO18AQ92614 2054 aaKnown RBP16.06■□□□□ 0.16
TGFB1-202ENST00000597453 SLC30A4O14863 429 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 DCLK1O15075 740 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 AP1G2O75843 785 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 AKAP3O75969 853 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 APBB3O95704 486 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 ASS1P00966 412 aaKnown RBP16.06■□□□□ 0.16
TGFB1-202ENST00000597453 SF3A2Q15428 464 aaKnown RBP16.06■□□□□ 0.16
TGFB1-202ENST00000597453 SGSM1Q2NKQ1 1148 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 C2orf27AQ580R0 203 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 RHBDF2Q6PJF5 856 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 C12orf40Q86WS4 652 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 KIAA1958Q8N8K9 716 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 PDZD8Q8NEN9 1154 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 SPATA20Q8TB22 786 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 SLC2A14Q8TDB8 520 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 OVCA2Q8WZ82 227 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 LOXL4Q96JB6 756 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 GSDMAQ96QA5 445 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 SMOQ99835 787 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 CCSER2Q9H7U1 834 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 RMND1Q9NWS8 449 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 GMIPQ9P107 970 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 NUP205Q92621 2012 aa16.06■□□□□ 0.16
TGFB1-202ENST00000597453 FAM92AA1XBS5 289 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 SLC9A3R1O14745 358 aaPredicted RBP16.05■□□□□ 0.16
TGFB1-202ENST00000597453 CALUO43852 315 aaPredicted RBP16.05■□□□□ 0.16
TGFB1-202ENST00000597453 SMC2O95347 1197 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 HLA-DRAP01903 254 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 ZDHHC11BP0C7U3 371 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 TRIM49P0CI25 452 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 TRIM49CP0CI26 452 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 CHRM1P11229 460 aaPredicted RBP16.05■□□□□ 0.16
TGFB1-202ENST00000597453 P4HA1P13674 534 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 PIK3CAP42336 1068 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 PGFP49763 221 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 PLK5Q496M5 336 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 HECTD3Q5T447 861 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 SNX30Q5VWJ9 437 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 CRYBG2Q8N1P7 616 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 C12orf29Q8N999 325 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 TAF4BQ92750 862 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 WBP2Q969T9 261 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 ZC3H10Q96K80 434 aaKnown RBP16.05■□□□□ 0.16
TGFB1-202ENST00000597453 TWNKQ96RR1 684 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 DUSP15Q9H1R2 295 aaPredicted RBP16.05■□□□□ 0.16
TGFB1-202ENST00000597453 SMOC1Q9H4F8 434 aa16.05■□□□□ 0.16
TGFB1-202ENST00000597453 RXFP3Q9NSD7 469 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms