RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 DEFB103AP81534 67 aa24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 ATP11AP98196 1134 aa24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 PPIGQ13427 754 aaKnown RBP eCLIP24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 C15orf59Q2T9L4 293 aaPredicted RBP24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 MAATS1Q7Z4T9 603 aa24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 FAM172AQ8WUF8 416 aa24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 TTPALQ9BTX7 342 aa24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 OSBPL8Q9BZF1 889 aa24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 ULBP1Q9BZM6 244 aa24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 DDX47Q9H0S4 455 aaKnown RBP24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 ZWILCHQ9H900 591 aa24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 STAP1Q9ULZ2 295 aa24.07■■□□□ 1.44
SPTBN4-210ENST00000596900 PATJQ8NI35 1801 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 HHLA1C9JL84 531 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 PHF2O75151 1096 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 H2AFXP16104 143 aaPredicted RBP24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 DAOAP59103 153 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 SMARCB1Q12824 385 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 BRD3Q15059 726 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 CMTR2Q8IYT2 770 aaKnown RBP24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 RNF25Q96BH1 459 aaPredicted RBP24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 RUNDC3BQ96NL0 473 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 SLITRK1Q96PX8 696 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 PNKPQ96T60 521 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 DDX23Q9BUQ8 820 aaKnown RBP24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 RHOBTB2Q9BYZ6 727 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 POPDC2Q9HBU9 364 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 TMEM30AQ9NV96 361 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 STIM2Q9P246 746 aa24.06■■□□□ 1.44
SPTBN4-210ENST00000596900 LRRD1A4D1F6 860 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 CCDC151A5D8V7 595 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 ERLIN1O75477 346 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 TRUB2O95900 331 aaKnown RBP24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 OR4Q2P0C623 313 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 ACRP10323 421 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 CHRNA3P32297 505 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 GRIK1P39086 918 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 FBXO38Q6PIJ6 1188 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 VSTM1Q6UX27 236 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 SCML4Q8N228 414 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 IRGQQ8WZA9 623 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 ABI2Q9NYB9 513 aaPredicted RBP24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 PCSK1NQ9UHG2 260 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 PCDHB5Q9Y5E4 795 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 COL4A6Q14031 1691 aa24.05■■□□□ 1.44
SPTBN4-210ENST00000596900 ZBED1O96006 694 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 RALAP11233 206 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 NOS2P35228 1153 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 PTPN7P35236 360 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 NDUFV1P49821 464 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 BTG3Q14201 252 aaPredicted RBP24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 ATP13A4Q4VNC1 1196 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 TFDP3Q5H9I0 405 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 STRADAQ7RTN6 431 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 TMEM173Q86WV6 379 aaPredicted RBP24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 ZNF558Q96NG5 402 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 TBCBQ99426 244 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 TRIM62Q9BVG3 475 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 RC3H2Q9HBD1 1191 aaKnown RBP24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 HOMER3Q9NSC5 361 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 KLHL11Q9NVR0 708 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 CPB1P15086 417 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 IL1R2P27930 398 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 SMTNL2Q2TAL5 461 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 USP41Q3LFD5 358 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 BOLA3Q53S33 107 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 TXNRD3NBQ6F5E7 133 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 FAM117BQ6P1L5 589 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 KCNT2Q6UVM3 1135 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 GPRIN1Q7Z2K8 1008 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 DEFB106AQ8N104 65 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 IGSF21Q96ID5 467 aa24.04■■□□□ 1.44
SPTBN4-210ENST00000596900 CAPN9O14815 690 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 TRIM66O15016 1216 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 TJP3O95049 919 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 LAG3P18627 525 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 CYP1B1Q16678 543 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 SLC25A52Q3SY17 297 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 RTP2Q5QGT7 225 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 SH3PXD2AQ5TCZ1 1133 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 SPOCD1Q6ZMY3 1216 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 OTOP2Q7RTS6 562 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 CENPIQ92674 756 aaPredicted RBP24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 MAGOHBQ96A72 148 aaKnown RBP24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 C11orf84Q9BUA3 381 aaPredicted RBP24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 EFR3BQ9Y2G0 817 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 NR2E1Q9Y466 385 aa24.03■■□□□ 1.44
SPTBN4-210ENST00000596900 PI4K2BG5E9Z4 385 aa24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 RAD51CO43502 376 aa24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 CYP2F1P24903 491 aa24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 MAGEA11P43364 429 aa24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 FPGSQ05932 587 aa24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 DHX34Q14147 1143 aaKnown RBP24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 DCAF6Q58WW2 860 aa24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 KCNT1Q5JUK3 1230 aa24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 SCYL2Q6P3W7 929 aa24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 PRELID2Q8N945 189 aa24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 C12orf50Q8NA57 414 aaPredicted RBP24.02■■□□□ 1.44
SPTBN4-210ENST00000596900 KCTD6Q8NC69 237 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms