RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 PDZD8Q8NEN9 1154 aa13.83□□□□□ -0.2
LIG1-212ENST00000596549 OVCA2Q8WZ82 227 aa13.83□□□□□ -0.2
LIG1-212ENST00000596549 FAM126AQ9BYI3 521 aaPredicted RBP13.83□□□□□ -0.2
LIG1-212ENST00000596549 LINC00597Q9H2U6 94 aa13.83□□□□□ -0.2
LIG1-212ENST00000596549 CCSER2Q9H7U1 834 aa13.83□□□□□ -0.2
LIG1-212ENST00000596549 CYP3A43Q9HB55 503 aa13.83□□□□□ -0.2
LIG1-212ENST00000596549 MAN1B1Q9UKM7 699 aa13.83□□□□□ -0.2
LIG1-212ENST00000596549 GVINP1Q7Z2Y8 2422 aa13.83□□□□□ -0.2
LIG1-212ENST00000596549 ZNF292O60281 2723 aa13.83□□□□□ -0.2
LIG1-212ENST00000596549 DMXL1Q9Y485 3027 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 CHURC1-FNTBB4DL54 471 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 CETN3O15182 167 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 RNF40O75150 1001 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 ABL1P00519 1130 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 CYP17A1P05093 508 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 FAM200BP0CF97 657 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 BMP6P22004 513 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 OPRD1P41143 372 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 FNTBP49356 437 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 DCAF17Q5H9S7 520 aaPredicted RBP13.82□□□□□ -0.2
LIG1-212ENST00000596549 SNX30Q5VWJ9 437 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 ISM2Q6H9L7 571 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 FILIP1Q7Z7B0 1213 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 SYNPOQ8N3V7 929 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 FBXL13Q8NEE6 735 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 ATRIPQ8WXE1 791 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 WBP2Q969T9 261 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 HNRNPABQ99729 332 aaKnown RBP13.82□□□□□ -0.2
LIG1-212ENST00000596549 P2RY13Q9BPV8 354 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 NT5C1AQ9BXI3 368 aa13.82□□□□□ -0.2
LIG1-212ENST00000596549 TNRC6BQ9UPQ9 1833 aaKnown RBP13.81□□□□□ -0.2
LIG1-212ENST00000596549 ANTXRLA6NF34 631 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 SMC2O95347 1197 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 NFATC1O95644 943 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 MBL2P11226 248 aaPredicted RBP13.81□□□□□ -0.2
LIG1-212ENST00000596549 TUBP50607 506 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 GALK1P51570 392 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 LRRC63Q05C16 580 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 GRSF1Q12849 480 aaKnown RBP eCLIP13.81□□□□□ -0.2
LIG1-212ENST00000596549 SRSF5Q13243 272 aaKnown RBP13.81□□□□□ -0.2
LIG1-212ENST00000596549 PPP2R5DQ14738 602 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 ZNF394Q53GI3 561 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 PPP1R26Q5T8A7 1209 aaPredicted RBP13.81□□□□□ -0.2
LIG1-212ENST00000596549 RUBCNQ92622 972 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 CD101Q93033 1021 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 SLC35C1Q96A29 364 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 JAKMIP2Q96AA8 810 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 CYFIP2Q96F07 1278 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 TSG101Q99816 390 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 POLR3BQ9NW08 1133 aaPredicted RBP13.81□□□□□ -0.2
LIG1-212ENST00000596549 OSER1Q9NX31 292 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 RAB20Q9NX57 234 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 CFAP97Q9P2B7 532 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 CHORDC1Q9UHD1 332 aaPredicted RBP13.81□□□□□ -0.2
LIG1-212ENST00000596549 RALGAPA1Q6GYQ0 2036 aa13.81□□□□□ -0.2
LIG1-212ENST00000596549 PLXND1Q9Y4D7 1925 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 CYP26A1O43174 497 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 CHRM1P11229 460 aaPredicted RBP13.8□□□□□ -0.2
LIG1-212ENST00000596549 DRD1P21728 446 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 FKBP3Q00688 224 aaKnown RBP13.8□□□□□ -0.2
LIG1-212ENST00000596549 MESP2Q0VG99 397 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 TCERG1LQ5VWI1 586 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 C12orf40Q86WS4 652 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 ELOA2Q8IYF1 753 aaPredicted RBP13.8□□□□□ -0.2
LIG1-212ENST00000596549 KIAA1958Q8N8K9 716 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 SLC4A11Q8NBS3 891 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 TATDN2Q93075 761 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 HINFPQ9BQA5 517 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 PNPLA8Q9NP80 782 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 CISHQ9NSE2 258 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 COMMD8Q9NX08 183 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 COQ4Q9Y3A0 265 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 SPAG17Q6Q759 2223 aa13.8□□□□□ -0.2
LIG1-212ENST00000596549 RIF1Q5UIP0 2472 aaKnown RBP13.79□□□□□ -0.2
LIG1-212ENST00000596549 TLR5O60602 858 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 RAD23BP54727 409 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 NRLP54845 237 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 DHCR24Q15392 516 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 LPAL2Q16609 132 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 HECTD3Q5T447 861 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 HEATR6Q6AI08 1181 aaKnown RBP13.79□□□□□ -0.2
LIG1-212ENST00000596549 TTI2Q6NXR4 508 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 LONP2Q86WA8 852 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 SFTPA1Q8IWL2 248 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 KIAA2013Q8IYS2 634 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 UBR7Q8N806 425 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 CCDC150Q8NCX0 1101 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 RPLP0P6Q8NHW5 317 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 DUSP9Q99956 384 aaKnown RBP13.79□□□□□ -0.2
LIG1-212ENST00000596549 NMUR1Q9HB89 426 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 CYLDQ9NQC7 956 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 NCDNQ9UBB6 729 aa13.79□□□□□ -0.2
LIG1-212ENST00000596549 DNAH14Q0VDD8 3507 aa13.78□□□□□ -0.2
LIG1-212ENST00000596549 PPP1R3GB7ZBB8 358 aa13.78□□□□□ -0.2
LIG1-212ENST00000596549 PSMA7O14818 248 aa13.78□□□□□ -0.2
LIG1-212ENST00000596549 HRO43593 1189 aa13.78□□□□□ -0.2
LIG1-212ENST00000596549 STX10O60499 249 aa13.78□□□□□ -0.2
LIG1-212ENST00000596549 GREM1O60565 184 aa13.78□□□□□ -0.2
LIG1-212ENST00000596549 ACO1P21399 889 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms