RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 C12orf40Q86WS4 652 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 DDX42Q86XP3 938 aaKnown RBP eCLIP16.92■□□□□ 0.3
LINC02560-201ENST00000596379 C12orf56Q8IXR9 622 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 TXNDC5Q8NBS9 432 aaKnown RBP16.92■□□□□ 0.3
LINC02560-201ENST00000596379 PLEKHO2Q8TD55 490 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 FBXO32Q969P5 355 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 CGNQ9P2M7 1197 aaKnown RBP16.92■□□□□ 0.3
LINC02560-201ENST00000596379 PVALEFA0A1B0GWK0 134 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 SGK1O00141 431 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 KHNYNO15037 678 aaKnown RBP16.91■□□□□ 0.3
LINC02560-201ENST00000596379 COCHO43405 550 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 ALDH1A2O94788 518 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 ADH1CP00326 375 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 EIF2DP41214 584 aaKnown RBP16.91■□□□□ 0.3
LINC02560-201ENST00000596379 AFMP43652 599 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 BIRC3Q13489 604 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 CUL4BQ13620 913 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 KNOP1Q1ED39 458 aaKnown RBP16.91■□□□□ 0.3
LINC02560-201ENST00000596379 FOXD4L6Q3SYB3 417 aaPredicted RBP16.91■□□□□ 0.3
LINC02560-201ENST00000596379 LY6G5CQ5SRR4 150 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 PSAPL1Q6NUJ1 521 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 FOXD4L3Q6VB84 417 aaPredicted RBP16.91■□□□□ 0.3
LINC02560-201ENST00000596379 PAQR9Q6ZVX9 377 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 IL17RCQ8NAC3 791 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 PDZD8Q8NEN9 1154 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 SCAMP5Q8TAC9 235 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 OVCA2Q8WZ82 227 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 ELMO3Q96BJ8 720 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 MED10Q9BTT4 135 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 SMYD3Q9H7B4 428 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 MAGEF1Q9HAY2 307 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 ARHGEF4Q9NR80 690 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 TBC1D14Q9P2M4 693 aa16.91■□□□□ 0.3
LINC02560-201ENST00000596379 MYH10P35580 1976 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 E2F8A0AVK6 867 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 LNP1A1A4G5 178 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 PATE3B3GLJ2 98 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 CLSTN1O94985 981 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 CHRM1P11229 460 aaPredicted RBP16.9■□□□□ 0.3
LINC02560-201ENST00000596379 ADH5P11766 374 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 GRIA2P42262 883 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 DHPSP49366 369 aaPredicted RBP16.9■□□□□ 0.3
LINC02560-201ENST00000596379 SHC2P98077 582 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 KDSRQ06136 332 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 ZNF699Q32M78 642 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 ZNF667Q5HYK9 610 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 HECTD3Q5T447 861 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 OLIG1Q8TAK6 271 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 RLN3Q8WXF3 142 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 ZFRQ96KR1 1074 aaKnown RBP16.9■□□□□ 0.3
LINC02560-201ENST00000596379 VRTNQ9H8Y1 702 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 ZDHHC4Q9NPG8 344 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 FAM13BQ9NYF5 915 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 PCDHA7Q9UN72 937 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 GON4LQ3T8J9 2241 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 ATP8B3O60423 1300 aa16.9■□□□□ 0.3
LINC02560-201ENST00000596379 LRRIQ3A6PVS8 624 aaPredicted RBP16.89■□□□□ 0.29
LINC02560-201ENST00000596379 TNFRSF10BO14763 440 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 C4BPAP04003 597 aaKnown RBP16.89■□□□□ 0.29
LINC02560-201ENST00000596379 TNFRSF4P43489 277 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 KIR2DL1P43626 348 aaPredicted RBP16.89■□□□□ 0.29
LINC02560-201ENST00000596379 NOVA1P51513 510 aaKnown RBP16.89■□□□□ 0.29
LINC02560-201ENST00000596379 GAD2Q05329 585 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 HSF5Q4G112 596 aaPredicted RBP16.89■□□□□ 0.29
LINC02560-201ENST00000596379 EOGTQ5NDL2 527 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 SNX30Q5VWJ9 437 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 DAB2IPQ5VWQ8 1189 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 SCARA5Q6ZMJ2 495 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 CYP2U1Q7Z449 544 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 FAM35AQ86V20 835 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 GRAMD1CQ8IYS0 662 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 FRMD1Q8N878 549 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 NAT16Q8N8M0 369 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 PIGKQ92643 395 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 SDCBP2Q9H190 292 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 CCSER2Q9H7U1 834 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 POLMQ9NP87 494 aaPredicted RBP16.89■□□□□ 0.29
LINC02560-201ENST00000596379 IL37Q9NZH6 218 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 CIZ1Q9ULV3 898 aaPredicted RBP16.89■□□□□ 0.29
LINC02560-201ENST00000596379 SH3BP1Q9Y3L3 701 aa16.89■□□□□ 0.29
LINC02560-201ENST00000596379 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.88■□□□□ 0.29
LINC02560-201ENST00000596379 GIPC1O14908 333 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 MAP3K13O43283 966 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 ADAM23O75077 832 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 AP3M2P53677 418 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 SLC5A3P53794 718 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 CLDN10P78369 228 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 IRX4P78413 519 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 NCOA4Q13772 614 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 ACOT1Q86TX2 421 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 FUKQ8N0W3 1084 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 PHTF2Q8N3S3 785 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 GOLGA5Q8TBA6 731 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 WHAMMQ8TF30 809 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 WBP2Q969T9 261 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 OTUB2Q96DC9 234 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 SMARCD1Q96GM5 515 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 TNIP3Q96KP6 325 aa16.88■□□□□ 0.29
LINC02560-201ENST00000596379 BACH2Q9BYV9 841 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms