RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 OLFM2O95897 454 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 ERBB2P04626 1255 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 USP17L7P0C7H9 530 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 LAMP2P13473 410 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 FERP16591 822 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 YWHAQP27348 245 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 KRT9P35527 623 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 GABRB2P47870 512 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 TKTL1P51854 596 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 PLCB2Q00722 1185 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 ARID5AQ03989 594 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 ZP2Q05996 745 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 PDCLQ13371 301 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 PUS10Q3MIT2 529 aaKnown RBP11.14□□□□□ -0.63
LIG1-210ENST00000596332 TXNDC8Q6A555 127 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 ELMSAN1Q6PJG2 1045 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 CCDC186Q7Z3E2 898 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 CACNA2D4Q7Z3S7 1137 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 TMC6Q7Z403 805 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 ITIH5Q86UX2 942 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 ZNF677Q86XU0 584 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 DNAAF5Q86Y56 855 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 SCUBE3Q8IX30 993 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 C1orf131Q8NDD1 294 aaKnown RBP11.14□□□□□ -0.63
LIG1-210ENST00000596332 ST13P5Q8NFI4 369 aaPredicted RBP11.14□□□□□ -0.63
LIG1-210ENST00000596332 ADAMTS19Q8TE59 1207 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 ZFRQ96KR1 1074 aaKnown RBP11.14□□□□□ -0.63
LIG1-210ENST00000596332 NECTIN4Q96NY8 510 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
LIG1-210ENST00000596332 PLA2G2FQ9BZM2 168 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 ULBP1Q9BZM6 244 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 ASAH2Q9NR71 780 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 TAS2R14Q9NYV8 317 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 GMIPQ9P107 970 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 HESX1Q9UBX0 185 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 USTQ9Y2C2 406 aa11.14□□□□□ -0.63
LIG1-210ENST00000596332 LUC7L2Q9Y383 392 aaKnown RBP11.14□□□□□ -0.63
LIG1-210ENST00000596332 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.14□□□□□ -0.633e-10■□□□□ 8.8
LIG1-210ENST00000596332 DOCK8Q8NF50 2099 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 A0A0C4DFX4 3053 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 A0A1W2PQH9 124 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 FAM170AA1A519 330 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 YJEFN3A6XGL0 299 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 E5RJQ4 531 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 E7ENQ6 273 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 ANHXE9PGG2 379 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 MED7O43513 233 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 MFAP3LO75121 409 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 RTN3O95197 1032 aaPredicted RBP11.13□□□□□ -0.63
LIG1-210ENST00000596332 OAS1P00973 400 aaKnown RBP11.13□□□□□ -0.63
LIG1-210ENST00000596332 FECHP22830 423 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 ANXA13P27216 316 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 WEE1P30291 646 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 DAOAP59103 153 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 VEPH1Q14D04 833 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 TAF5Q15542 800 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 CLEC16AQ2KHT3 1053 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 C2CD6Q53TS8 623 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 FAM78AQ5JUQ0 283 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 SFMBT2Q5VUG0 894 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 PDZD4Q76G19 769 aaPredicted RBP11.13□□□□□ -0.63
LIG1-210ENST00000596332 MON1AQ86VX9 555 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.13□□□□□ -0.63
LIG1-210ENST00000596332 ZNF276Q8N554 614 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 LEMD2Q8NC56 503 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 CPA5Q8WXQ8 436 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 FGF14Q92915 247 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 WBP2Q969T9 261 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 IQCDQ96DY2 449 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 MCRS1Q96EZ8 462 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 CHP1Q99653 195 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 ADAM33Q9BZ11 813 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 ATXN3LQ9H3M9 355 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 TRPV4Q9HBA0 871 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 CYLDQ9NQC7 956 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 EPS15L1Q9UBC2 864 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 CDH7Q9ULB5 785 aa11.13□□□□□ -0.63
LIG1-210ENST00000596332 MRPS23Q9Y3D9 190 aaKnown RBP11.13□□□□□ -0.63
LIG1-210ENST00000596332 OBSL1O75147 1896 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 ZNF638Q14966 1978 aaKnown RBP11.12□□□□□ -0.63
LIG1-210ENST00000596332 DENND4CQ5VZ89 1909 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 ANAPC1Q9H1A4 1944 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 ZNF197O14709 1029 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 GREM1O60565 184 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 TBX18O95935 607 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 ZBED1O96006 694 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 MMP8P22894 467 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 CDC25BP30305 580 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 PDE6CP51160 858 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 CENPCQ03188 943 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 ADIGQ0VDE8 80 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 IFRD2Q12894 506 aaPredicted RBP11.12□□□□□ -0.63
LIG1-210ENST00000596332 EIF4EBP2Q13542 120 aaPredicted RBP11.12□□□□□ -0.63
LIG1-210ENST00000596332 ASIC2Q16515 512 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 CYP4A22Q5TCH4 519 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 TANGO2Q6ICL3 276 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 TRNP1Q6NT89 227 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 PARM1Q6UWI2 310 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 ADHFE1Q8IWW8 467 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms