RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SMTNL2Q2TAL5 461 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 LRRC23Q53EV4 343 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 SAPCD2Q86UD0 394 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 SESTD1Q86VW0 696 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 XYLT1Q86Y38 959 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 NT5DC4Q86YG4 428 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 RCOR2Q8IZ40 523 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 AGGF1Q8N302 714 aaeCLIP17.84■□□□□ 0.457e-20■■■■□ 22.6
SHKBP1-205ENST00000594973 FITM2Q8N6M3 262 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 ATL2Q8NHH9 583 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 USP6NLQ92738 828 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 SLCO2A1Q92959 643 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 ART4Q93070 314 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 KLK14Q9P0G3 267 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 RPL26L1Q9UNX3 145 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 TLDC2A0PJX2 215 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 SIGLEC16A6NMB1 481 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 RECQL4O94761 1208 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 PYGLP06737 847 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 TPBGLP0DKB5 382 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 VDRP11473 427 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 CETN2P41208 172 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 TUBP50607 506 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 SF3A3Q12874 501 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 KCNT1Q5JUK3 1230 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 UBAP2Q5T6F2 1119 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 MFSD5Q6N075 450 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 RGMBQ6NW40 437 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 TMEM154Q6P9G4 183 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 IFT43Q96FT9 208 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 ZWILCHQ9H900 591 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 PIDD1Q9HB75 910 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 NKX1-2Q9UD57 310 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 CITO14578 2027 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 PEX11AO75192 247 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 GAS8O95995 478 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 CYP3A5P20815 502 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 GPD2P43304 727 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 IFNAR2P48551 515 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 INCA1Q0VD86 236 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 SNX17Q15036 470 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 PRUNE1Q86TP1 453 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 UHMK1Q8TAS1 419 aaKnown RBP17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 GRK7Q8WTQ7 553 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 HAUS1Q96CS2 278 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 MRPL45Q9BRJ2 306 aaKnown RBP17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 NT5C1AQ9BXI3 368 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 SEMA4AQ9H3S1 761 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 PLEKHA5Q9HAU0 1116 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 GGT7Q9UJ14 662 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 TSPAN16Q9UKR8 245 aa17.83■□□□□ 0.45
SHKBP1-205ENST00000594973 HMGCRP04035 888 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 IMPDH2P12268 514 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 ADAM17P78536 824 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 CCNG2Q16589 344 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 FSCN1Q16658 493 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 TRIM74Q86UV6 250 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 TRIM73Q86UV7 250 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 TMEM237Q96Q45 408 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 APBA2Q99767 749 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 LRMDAQ9H2I8 198 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 FGFR1OP2Q9NVK5 253 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 LMCD1Q9NZU5 365 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 GJD2Q9UKL4 321 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 ZNF236Q9UL36 1845 aa17.83■□□□□ 0.44
SHKBP1-205ENST00000594973 TCP11X1B4DZS4 312 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 ADCY8P40145 1251 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 LRRC38Q5VT99 294 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 OR52E8Q6IFG1 317 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 SPOCD1Q6ZMY3 1216 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 GSTA5Q7RTV2 222 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 ACOT1Q86TX2 421 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 ARFGAP1Q8N6T3 406 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 C7orf31Q8N865 590 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 NIPA2Q8N8Q9 360 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 DYDC1Q8WWB3 177 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 FAM49BQ9NUQ9 324 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 TRIP11Q15643 1979 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 C17orf102A2RUQ5 167 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 HAS3O00219 553 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 TP73O15350 636 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 LRCH4O75427 683 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 CRHR2Q13324 411 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 SLC29A2Q14542 456 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 WASHC2DQ5SRD0 308 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 FAM102AQ5T9C2 384 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 RBM12BQ8IXT5 1001 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 BEST2Q8NFU1 509 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 DNAJC9Q8WXX5 260 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 UTP4Q969X6 686 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 ROPN1BQ9BZX4 212 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 ROPN1Q9HAT0 212 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 ETNK1Q9HBU6 452 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 PCSK1NQ9UHG2 260 aa17.82■□□□□ 0.44
SHKBP1-205ENST00000594973 MYADML2A6NDP7 307 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 UPP2O95045 317 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 TJP3O95049 919 aa17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 STAU1O95793 577 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-205ENST00000594973 C6orf222P0C671 652 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms