RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TM7SF2O76062 418 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 RNF8O76064 485 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 TRUB2O95900 331 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 EDN1P05305 212 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 ASPAP45381 313 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 GABRB2P47870 512 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 PAPOLAP51003 745 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 PSMC1P62191 440 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 TRPC3Q13507 836 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 CWF19L1Q69YN2 538 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 C4orf22Q6V702 233 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 XYLT1Q86Y38 959 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 GALNT15Q8N3T1 639 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 FAM71DQ8N9W8 422 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 SMC1BQ8NDV3 1235 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 WDR60Q8WVS4 1066 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 ATG4CQ96DT6 458 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 MCRS1Q96EZ8 462 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 ZNF184Q99676 751 aaPredicted RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 MRPL4Q9BYD3 311 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 DLGAP2Q9P1A6 1054 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 TAGLN3Q9UI15 199 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 ADAMTS5Q9UNA0 930 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 RIPK3Q9Y572 518 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 ENO4A6NNW6 628 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 BIRC5O15392 142 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 CIB2O75838 187 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 GCLCP48506 637 aaPredicted RBP13.79□□□□□ -0.2
VRK3-209ENST00000594948 SESN3P58005 492 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 YWHAGP61981 247 aaKnown RBP eCLIP13.79□□□□□ -0.2
VRK3-209ENST00000594948 CAPSQ13938 189 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 TARBP2Q15633 366 aaKnown RBP13.79□□□□□ -0.2
VRK3-209ENST00000594948 SMTNL2Q2TAL5 461 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 ZNF699Q32M78 642 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 KYAT3Q6YP21 454 aaKnown RBP13.79□□□□□ -0.2
VRK3-209ENST00000594948 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 ADGRG6Q86SQ4 1221 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 SESTD1Q86VW0 696 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 MYLK4Q86YV6 388 aaPredicted RBP13.79□□□□□ -0.2
VRK3-209ENST00000594948 KIAA0319LQ8IZA0 1049 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 SPATA18Q8TC71 538 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 E2F7Q96AV8 911 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 PRR11Q96HE9 360 aaPredicted RBP13.79□□□□□ -0.2
VRK3-209ENST00000594948 MTMR12Q9C0I1 747 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 NMUR2Q9GZQ4 415 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 ALG13Q9NP73 1137 aaKnown RBP13.79□□□□□ -0.2
VRK3-209ENST00000594948 PAPOLBQ9NRJ5 636 aaKnown RBP13.79□□□□□ -0.2
VRK3-209ENST00000594948 ASNSD1Q9NWL6 643 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 PLA2G4CQ9UP65 541 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 TELO2Q9Y4R8 837 aa13.79□□□□□ -0.2
VRK3-209ENST00000594948 FAM237BA0A1B0GVD1 139 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 EME2A4GXA9 379 aaPredicted RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 B2RBV5 119 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 TRIM49D1C9J1S8 452 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 SPECC1L-ADORA2AF8WAN1 911 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 CSDE1O75534 798 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 SNUPNO95149 360 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 CD48P09326 243 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 MIPP30301 263 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 SARNPP82979 210 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 THOC5Q13769 683 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 RBBP5Q15291 538 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 KCNT1Q5JUK3 1230 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 DARS2Q6PI48 645 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 SCUBE1Q8IWY4 988 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 XYLT2Q9H1B5 865 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 STN1Q9H668 368 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 METTL5Q9NRN9 209 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 KRT82Q9NSB4 513 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 NRBP2Q9NSY0 501 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 CPSF3Q9UKF6 684 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 MSCO60682 206 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 SNNO75324 88 aaPredicted RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 FKBP6O75344 327 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 TNNC2P02585 160 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 GNAT1P11488 350 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 TNFSF9P41273 254 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 SERPINB9P50453 376 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 ACTR3P61158 418 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 YWHAZP63104 245 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 WASHC5Q12768 1159 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 MTMR2Q13614 643 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 TEX44Q53QW1 395 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 STXBP5Q5T5C0 1151 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 TMCO4Q5TGY1 634 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 AP1ARQ63HQ0 302 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 SNRNP48Q6IEG0 339 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 AAGABQ6PD74 315 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 ILDR2Q71H61 639 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 ZC3H18Q86VM9 953 aaKnown RBP13.78□□□□□ -0.2
VRK3-209ENST00000594948 MCUQ8NE86 351 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 UCMAQ8WVF2 138 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 USP6NLQ92738 828 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 FAF2Q96CS3 445 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 TEPSINQ96N21 525 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 BCO2Q9BYV7 579 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 SDCBP2Q9H190 292 aa13.78□□□□□ -0.2
VRK3-209ENST00000594948 POPDC2Q9HBU9 364 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms