RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ADORA2BP29275 332 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 CNR2P34972 360 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 ID4P47928 161 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 MAP3K7CLP57077 242 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 COBLL1Q53SF7 1204 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 HECTD3Q5T447 861 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 SNX30Q5VWJ9 437 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 FILIP1Q7Z7B0 1213 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 DDX42Q86XP3 938 aaKnown RBP eCLIP24.86■■□□□ 1.57
LSM4-204ENST00000594828 ADGRG2Q8IZP9 1017 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 SMARCE1Q969G3 411 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 CYFIP2Q96F07 1278 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 TIGD1Q96MW7 591 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 HNRNPABQ99729 332 aaKnown RBP24.86■■□□□ 1.57
LSM4-204ENST00000594828 TSG101Q99816 390 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 CFAP97Q9P2B7 532 aa24.86■■□□□ 1.57
LSM4-204ENST00000594828 HELZP42694 1942 aaKnown RBP24.86■■□□□ 1.57
LSM4-204ENST00000594828 FAM92AA1XBS5 289 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 COCHO43405 550 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 HRO43593 1189 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 STX10O60499 249 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 FAM200BP0CF97 657 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 CD58P19256 250 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 SIM2Q14190 667 aaPredicted RBP24.85■■□□□ 1.57
LSM4-204ENST00000594828 PRR23BQ6ZRT6 265 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 SPATA20Q8TB22 786 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 ERCC4Q92889 916 aaPredicted RBP24.85■■□□□ 1.57
LSM4-204ENST00000594828 DNAI2Q9GZS0 605 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 FBXO44Q9H4M3 255 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 GMIPQ9P107 970 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 GMEB2Q9UKD1 530 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 SLC8A2Q9UPR5 921 aa24.85■■□□□ 1.57
LSM4-204ENST00000594828 ZDHHC11BP0C7U3 371 aa24.84■■□□□ 1.57
LSM4-204ENST00000594828 HOXC13P31276 330 aa24.84■■□□□ 1.57
LSM4-204ENST00000594828 MXI1P50539 228 aa24.84■■□□□ 1.57
LSM4-204ENST00000594828 FKBP3Q00688 224 aaKnown RBP24.84■■□□□ 1.57
LSM4-204ENST00000594828 LPAL2Q16609 132 aa24.84■■□□□ 1.57
LSM4-204ENST00000594828 GPR161Q8N6U8 529 aaKnown RBP24.84■■□□□ 1.57
LSM4-204ENST00000594828 FBXL13Q8NEE6 735 aa24.84■■□□□ 1.57
LSM4-204ENST00000594828 WHAMMQ8TF30 809 aa24.84■■□□□ 1.57
LSM4-204ENST00000594828 SEMA4DQ92854 862 aa24.84■■□□□ 1.57
LSM4-204ENST00000594828 GTPBP4Q9BZE4 634 aaKnown RBP24.84■■□□□ 1.57
LSM4-204ENST00000594828 SCAMP3O14828 347 aaKnown RBP24.83■■□□□ 1.57
LSM4-204ENST00000594828 CILPO75339 1184 aa24.83■■□□□ 1.57
LSM4-204ENST00000594828 TUBP50607 506 aa24.83■■□□□ 1.57
LSM4-204ENST00000594828 ANKRD40Q6AI12 368 aa24.83■■□□□ 1.57
LSM4-204ENST00000594828 WDR5BQ86VZ2 330 aa24.83■■□□□ 1.57
LSM4-204ENST00000594828 EZH1Q92800 747 aaPredicted RBP24.83■■□□□ 1.57
LSM4-204ENST00000594828 FAXDC2Q96IV6 333 aa24.83■■□□□ 1.57
LSM4-204ENST00000594828 CCSER2Q9H7U1 834 aa24.83■■□□□ 1.57
LSM4-204ENST00000594828 RAB20Q9NX57 234 aa24.83■■□□□ 1.57
LSM4-204ENST00000594828 TBC1D14Q9P2M4 693 aa24.83■■□□□ 1.57
LSM4-204ENST00000594828 EP300Q09472 2414 aaPredicted RBP24.83■■□□□ 1.56
LSM4-204ENST00000594828 CYP17A1P05093 508 aa24.82■■□□□ 1.56
LSM4-204ENST00000594828 SRSF5Q13243 272 aaKnown RBP24.82■■□□□ 1.56
LSM4-204ENST00000594828 DHCR24Q15392 516 aa24.82■■□□□ 1.56
LSM4-204ENST00000594828 TCERG1LQ5VWI1 586 aa24.82■■□□□ 1.56
LSM4-204ENST00000594828 LAIR1Q6GTX8 287 aa24.82■■□□□ 1.56
LSM4-204ENST00000594828 CLEC20AQ6ZU45 233 aa24.82■■□□□ 1.56
LSM4-204ENST00000594828 RPLP0P6Q8NHW5 317 aa24.82■■□□□ 1.56
LSM4-204ENST00000594828 NACA2Q9H009 215 aa24.82■■□□□ 1.56
LSM4-204ENST00000594828 TLR8Q9NR97 1041 aaKnown RBP24.82■■□□□ 1.56
LSM4-204ENST00000594828 GVINP1Q7Z2Y8 2422 aa24.81■■□□□ 1.56
LSM4-204ENST00000594828 E2F8A0AVK6 867 aa24.81■■□□□ 1.56
LSM4-204ENST00000594828 SLC16A3O15427 465 aaKnown RBP24.81■■□□□ 1.56
LSM4-204ENST00000594828 OPRD1P41143 372 aa24.81■■□□□ 1.56
LSM4-204ENST00000594828 PMS1P54277 932 aaKnown RBP24.81■■□□□ 1.56
LSM4-204ENST00000594828 ZNF394Q53GI3 561 aa24.81■■□□□ 1.56
LSM4-204ENST00000594828 ZC3H3Q8IXZ2 948 aaKnown RBP24.81■■□□□ 1.56
LSM4-204ENST00000594828 TTC39CQ8N584 583 aa24.81■■□□□ 1.56
LSM4-204ENST00000594828 CAMKK1Q8N5S9 505 aa24.81■■□□□ 1.56
LSM4-204ENST00000594828 CCDC26Q8TAB7 109 aa24.81■■□□□ 1.56
LSM4-204ENST00000594828 JAKMIP2Q96AA8 810 aa24.81■■□□□ 1.56
LSM4-204ENST00000594828 ZFRQ96KR1 1074 aaKnown RBP24.81■■□□□ 1.56
LSM4-204ENST00000594828 SH3BP1Q9Y3L3 701 aa24.81■■□□□ 1.56
LSM4-204ENST00000594828 OTOGLQ3ZCN5 2332 aa24.81■■□□□ 1.56
LSM4-204ENST00000594828 CCDC163A0A0D9SF12 145 aa24.8■■□□□ 1.56
LSM4-204ENST00000594828 HHLA1C9JL84 531 aa24.8■■□□□ 1.56
LSM4-204ENST00000594828 PXNP49023 591 aaPredicted RBP24.8■■□□□ 1.56
LSM4-204ENST00000594828 PGFP49763 221 aa24.8■■□□□ 1.56
LSM4-204ENST00000594828 LRRC63Q05C16 580 aa24.8■■□□□ 1.56
LSM4-204ENST00000594828 GAB4Q2WGN9 574 aa24.8■■□□□ 1.56
LSM4-204ENST00000594828 DCAF17Q5H9S7 520 aaPredicted RBP24.8■■□□□ 1.56
LSM4-204ENST00000594828 RHBDF2Q6PJF5 856 aa24.8■■□□□ 1.56
LSM4-204ENST00000594828 CEP68Q76N32 757 aa24.8■■□□□ 1.56
LSM4-204ENST00000594828 GPRIN1Q7Z2K8 1008 aa24.8■■□□□ 1.56
LSM4-204ENST00000594828 ELOA2Q8IYF1 753 aaPredicted RBP24.8■■□□□ 1.56
LSM4-204ENST00000594828 RMDN1Q96DB5 314 aa24.8■■□□□ 1.56
LSM4-204ENST00000594828 HEXIM2Q96MH2 286 aaKnown RBP24.8■■□□□ 1.56
LSM4-204ENST00000594828 POLR3BQ9NW08 1133 aaPredicted RBP24.8■■□□□ 1.56
LSM4-204ENST00000594828 SCML2Q9UQR0 700 aa24.8■■□□□ 1.56
LSM4-204ENST00000594828 TRIM49BA6NDI0 452 aa24.79■■□□□ 1.56
LSM4-204ENST00000594828 TLR5O60602 858 aa24.79■■□□□ 1.56
LSM4-204ENST00000594828 ACO1P21399 889 aaKnown RBP24.79■■□□□ 1.56
LSM4-204ENST00000594828 STIM1Q13586 685 aa24.79■■□□□ 1.56
LSM4-204ENST00000594828 PPP1R26Q5T8A7 1209 aaPredicted RBP24.79■■□□□ 1.56
LSM4-204ENST00000594828 ISM2Q6H9L7 571 aa24.79■■□□□ 1.56
LSM4-204ENST00000594828 SYT13Q7L8C5 426 aa24.79■■□□□ 1.56
LSM4-204ENST00000594828 TATDN2Q93075 761 aa24.79■■□□□ 1.56
LSM4-204ENST00000594828 ACDQ96AP0 544 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms