RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TRIB2Q92519 343 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 TRIM31Q9BZY9 425 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 MIS12Q9H081 205 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 ASB7Q9H672 318 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 PCDHA3Q9Y5H8 950 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 TMEM88BA6NKF7 163 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 PFDN1O60925 122 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 ZNF189O75820 626 aaPredicted RBP16.08■□□□□ 0.16
PNKP-204ENST00000594661 HSPA6P17066 643 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 RRM1P23921 792 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 CTNNA2P26232 953 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 MGAT5Q09328 741 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 KYAT1Q16773 422 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 RASIP1Q5U651 963 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 DENND2CQ68D51 928 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 MON1BQ7L1V2 547 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 TMEM40Q8WWA1 233 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 ZNF606Q8WXB4 792 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 ACAP3Q96P50 834 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 NR1H4Q96RI1 486 aaPredicted RBP16.08■□□□□ 0.16
PNKP-204ENST00000594661 PPP1R12CQ9BZL4 782 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 CXCL16Q9H2A7 254 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 TUBGCP4Q9UGJ1 667 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 TBC1D30Q9Y2I9 924 aa16.08■□□□□ 0.16
PNKP-204ENST00000594661 PHF2O75151 1096 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 CYBAP13498 195 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 DARSP14868 501 aaKnown RBP16.07■□□□□ 0.16
PNKP-204ENST00000594661 GRM5P41594 1212 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 FCGRTP55899 365 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 PHEXP78562 749 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 CAP1Q01518 475 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 TMEM132DQ14C87 1099 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 TRIM72Q6ZMU5 477 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 TAOK1Q7L7X3 1001 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 C17orf50Q8WW18 174 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 TRIM11Q96F44 468 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 EIF2AQ9BY44 585 aaKnown RBP16.07■□□□□ 0.16
PNKP-204ENST00000594661 GPBP1L1Q9HC44 474 aaPredicted RBP16.07■□□□□ 0.16
PNKP-204ENST00000594661 AVENQ9NQS1 362 aaPredicted RBP16.07■□□□□ 0.16
PNKP-204ENST00000594661 CITO14578 2027 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 E2F6O75461 281 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 C6orf222P0C671 652 aaPredicted RBP16.07■□□□□ 0.16
PNKP-204ENST00000594661 CDC42EP1Q00587 391 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 CBX3Q13185 183 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 DHX34Q14147 1143 aaKnown RBP16.07■□□□□ 0.16
PNKP-204ENST00000594661 WDR72Q3MJ13 1102 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 DCAF4L1Q3SXM0 396 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 ZNF667Q5HYK9 610 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 ARMCX6Q7L4S7 300 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 PRELID2Q8N945 189 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 LRRC8CQ8TDW0 803 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
PNKP-204ENST00000594661 C18orf8Q96DM3 657 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 HIC2Q96JB3 615 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 C11orf70Q9BRQ4 267 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 KATNAL1Q9BW62 490 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 SDCBP2Q9H190 292 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 PCDH18Q9HCL0 1135 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 KLHL14Q9P2G3 628 aa16.07■□□□□ 0.16
PNKP-204ENST00000594661 C17orf102A2RUQ5 167 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 FAM187AA6NFU0 413 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 DUSP11O75319 330 aaKnown RBP16.06■□□□□ 0.16
PNKP-204ENST00000594661 ASLP04424 464 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 POLR2BP30876 1174 aaKnown RBP16.06■□□□□ 0.16
PNKP-204ENST00000594661 CHRNA3P32297 505 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 GJA8P48165 433 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 FLT3LGP49771 235 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 PMS2P54278 862 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 CDH8P55286 799 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 RNASELQ05823 741 aaKnown RBP16.06■□□□□ 0.16
PNKP-204ENST00000594661 TRIM32Q13049 653 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 DAB2IPQ5VWQ8 1189 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 SLC27A1Q6PCB7 646 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 ECHDC2Q86YB7 292 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 JAMLQ86YT9 394 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 TTC8Q8TAM2 541 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 HHIPL1Q96JK4 782 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 ERP44Q9BS26 406 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 BCO2Q9BYV7 579 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 SMYD3Q9H7B4 428 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 ZDHHC18Q9NUE0 388 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.06■□□□□ 0.16
PNKP-204ENST00000594661 RHBDL2Q9NX52 303 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 SNTG2Q9NY99 539 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 HSFX1Q9UBD0 423 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 YY1P25490 414 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 HOXC8P31273 242 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 SNX17Q15036 470 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 LIN52Q52LA3 116 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 SLC13A5Q86YT5 568 aaPredicted RBP16.06■□□□□ 0.16
PNKP-204ENST00000594661 ZDHHC14Q8IZN3 488 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 LRRC43Q8N309 656 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 TFAP2BQ92481 460 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 AGAP3Q96P47 875 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 DENND2DQ9H6A0 471 aaPredicted RBP16.06■□□□□ 0.16
PNKP-204ENST00000594661 TLE6Q9H808 572 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 RASAL2Q9UJF2 1139 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 MTUS1Q9ULD2 1270 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 HES2Q9Y543 173 aa16.06■□□□□ 0.16
PNKP-204ENST00000594661 HTTP42858 3142 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms