RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 GRSF1Q12849 480 aaKnown RBP eCLIP18.34■□□□□ 0.53
IRF3-208ENST00000594387 USP4Q13107 963 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 TRIM68Q6AZZ1 485 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 CLEC20AQ6ZU45 233 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 KIAA1958Q8N8K9 716 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 WHAMMQ8TF30 809 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 NKD2Q969F2 451 aaPredicted RBP18.34■□□□□ 0.53
IRF3-208ENST00000594387 DUSP16Q9BY84 665 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 SEMA4AQ9H3S1 761 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 CLSTN2Q9H4D0 955 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 PNPLA8Q9NP80 782 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 HESX1Q9UBX0 185 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 CPQQ9Y646 472 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 MYOFQ9NZM1 2061 aa18.34■□□□□ 0.53
IRF3-208ENST00000594387 PMM2O15305 246 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 OAS1P00973 400 aaKnown RBP18.33■□□□□ 0.52
IRF3-208ENST00000594387 SP9P0CG40 484 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 CD19P15391 556 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 ACO1P21399 889 aaKnown RBP18.33■□□□□ 0.52
IRF3-208ENST00000594387 TUBP50607 506 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 CCR3P51677 355 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 GOLGA8FQ08AF8 430 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 GOLGA8DPQ0D2H9 430 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 KCNH2Q12809 1159 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 SGO2Q562F6 1265 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 PPP1R26Q5T8A7 1209 aaPredicted RBP18.33■□□□□ 0.52
IRF3-208ENST00000594387 SNX30Q5VWJ9 437 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 TADA2BQ86TJ2 420 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 SYNPOQ8N3V7 929 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 ZMIZ2Q8NF64 920 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 RNF38Q9H0F5 515 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 NUP62CLQ9H1M0 184 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 CHRDQ9H2X0 955 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 ECT2Q9H8V3 914 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 SMPD4Q9NXE4 827 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 IL37Q9NZH6 218 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 GMIPQ9P107 970 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 TBC1D14Q9P2M4 693 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 KIAA1257Q9ULG3 409 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 SH3BP1Q9Y3L3 701 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 WNT6Q9Y6F9 365 aa18.33■□□□□ 0.52
IRF3-208ENST00000594387 PROB1E7EW31 1015 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 AFPP02771 609 aaKnown RBP18.32■□□□□ 0.52
IRF3-208ENST00000594387 CHRNB1P11230 501 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 ARSAP15289 507 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 PSEN1P49768 467 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 RAD23BP54727 409 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 NRLP54845 237 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 MTAPQ13126 283 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 ZNF528Q3MIS6 628 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 PPM1KQ8N3J5 372 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 SLC4A11Q8NBS3 891 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 CCDC26Q8TAB7 109 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 ATRIPQ8WXE1 791 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 PHOX2BQ99453 314 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 ARID3AQ99856 593 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 HPS4Q9NQG7 708 aa18.32■□□□□ 0.52
IRF3-208ENST00000594387 FAM92AA1XBS5 289 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 SHISA7A6NL88 538 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 GFRA3O60609 400 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 ATG13O75143 517 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 OLFM2O95897 454 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 RALAP11233 206 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 ATP5C1P36542 298 aaKnown RBP18.31■□□□□ 0.52
IRF3-208ENST00000594387 CXCL12P48061 93 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 MARSP56192 900 aaKnown RBP18.31■□□□□ 0.52
IRF3-208ENST00000594387 FZD5Q13467 585 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 ARHGAP17Q68EM7 881 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 SPEM1Q8N4L4 309 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 EHBP1Q8NDI1 1231 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 P2RY13Q9BPV8 354 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 FAM126AQ9BYI3 521 aaPredicted RBP18.31■□□□□ 0.52
IRF3-208ENST00000594387 UBXN6Q9BZV1 441 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 CFAP97Q9P2B7 532 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 SCML2Q9UQR0 700 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 PCDHB4Q9Y5E5 795 aa18.31■□□□□ 0.52
IRF3-208ENST00000594387 E2F8A0AVK6 867 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 TRDMT1O14717 391 aaKnown RBP18.3■□□□□ 0.52
IRF3-208ENST00000594387 COCHO43405 550 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 VDRP11473 427 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 DRD1P21728 446 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 GJA4P35212 333 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 EML3Q32P44 896 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 TXNDC11Q6PKC3 985 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 MAMSTRQ6ZN01 415 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 CLEC17AQ6ZS10 378 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 FAM114A1Q8IWE2 563 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 TRIM59Q8IWR1 403 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 ARHGAP18Q8N392 663 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 ANKRD52Q8NB46 1076 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 CDK5RAP1Q96SZ6 601 aaKnown RBP18.3■□□□□ 0.52
IRF3-208ENST00000594387 LINC00597Q9H2U6 94 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 CCSER2Q9H7U1 834 aa18.3■□□□□ 0.52
IRF3-208ENST00000594387 TLR5O60602 858 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 ZDHHC11BP0C7U3 371 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 MTIF2P46199 727 aaKnown RBP18.29■□□□□ 0.52
IRF3-208ENST00000594387 GALK1P51570 392 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 BCAT1P54687 386 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 FBXO43Q4G163 708 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 TMEM270Q6UE05 265 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms