RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 MYL6P60660 151 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 MRPS21P82921 87 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 COL9A2Q14055 689 aaPredicted RBP11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 DUOXA2Q1HG44 320 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 SCARA5Q6ZMJ2 495 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 LPCAT2Q7L5N7 544 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 BBS7Q8IWZ6 715 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 ZFRQ96KR1 1074 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 ACOX2Q99424 681 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 GTPBP2Q9BX10 602 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 SNX25Q9H3E2 840 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 CCSER2Q9H7U1 834 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 NXF1Q9UBU9 619 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 R3HCC1Q9Y3T6 440 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 PLXND1Q9Y4D7 1925 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 TGFB1I1O43294 461 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 CEACAM1P13688 526 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 TNNI1P19237 187 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 CSRP1P21291 193 aaKnown RBP11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 NOP14P78316 857 aaKnown RBP11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 WDR72Q3MJ13 1102 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 TDRD10Q5VZ19 366 aaKnown RBP11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 CCDC73Q6ZRK6 1079 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 DPH6Q7L8W6 267 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 WDR49Q8IV35 697 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 PLEKHO2Q8TD55 490 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 WHAMMQ8TF30 809 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 FBXO32Q969P5 355 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 C8orf48Q96LL4 319 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 SDCBP2Q9H190 292 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 GMIPQ9P107 970 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 RAD54BQ9Y620 910 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 PCDH15Q96QU1 1955 aa11.92□□□□□ -0.5
PRKCSH-220ENST00000593104 CACNA1GO43497 2377 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 CACNA1EQ15878 2313 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 MYH10P35580 1976 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 TBC1D3BA6NDS4 549 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 PCNX2A6NKB5 2137 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 SRRM3A6NNA2 597 aaPredicted RBP11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 A8MXQ7 604 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 TULP3O75386 442 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 BEST1O76090 585 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 ALDH1A2O94788 518 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 CLSTN1O94985 981 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 GABRG2P18507 467 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 SYT1P21579 422 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 YWHAQP27348 245 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 TNNC1P63316 161 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 ASIC1P78348 528 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 CYP24A1Q07973 514 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 MAPRE1Q15691 268 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 SNRNP35Q16560 246 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 ANO4Q32M45 955 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 EOGTQ5NDL2 527 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 C10orf76Q5T2E6 689 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 ERICH6BQ5W0A0 696 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 LYSMD4Q5XG99 296 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 EGFLAMQ63HQ2 1017 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 PAQR9Q6ZVX9 377 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 TMEM25Q86YD3 366 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 ETFBKMTQ8IXQ9 262 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 CCDC65Q8IXS2 484 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 ZNF513Q8N8E2 541 aaPredicted RBP11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 KDF1Q8NAX2 398 aaPredicted RBP11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 ZCCHC14Q8WYQ9 949 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 DHX58Q96C10 678 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 P2RY11Q96G91 374 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 CAMK1GQ96NX5 476 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 CGRRF1Q99675 332 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 NUSAP1Q9BXS6 441 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 BLZF1Q9H2G9 400 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 POLMQ9NP87 494 aaPredicted RBP11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■■□□□ 12.4
PRKCSH-220ENST00000593104 AGPAT3Q9NRZ7 376 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 CALCOCO1Q9P1Z2 691 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 HMGXB4Q9UGU5 601 aa11.91□□□□□ -0.5
PRKCSH-220ENST00000593104 TNFRSF10BO14763 440 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 MDM4O15151 490 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 TBX18O95935 607 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 ADH1CP00326 375 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 CCDC130P13994 396 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 GRIA2P42262 883 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 PDE6CP51160 858 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 SLC5A3P53794 718 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 SIM1P81133 766 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 RPL6Q02878 288 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 CUL4AQ13619 759 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 ALCAMQ13740 583 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 SLC39A14Q15043 492 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 E2F4Q16254 413 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 FOXD4L5Q5VV16 416 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 TOGARAM2Q6ZUX3 1019 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 EPM2AIP1Q7L775 607 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 FAM35AQ86V20 835 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 SYT12Q8IV01 421 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 SLC41A1Q8IVJ1 513 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 NUP93Q8N1F7 819 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 CHCHD4Q8N4Q1 142 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 B3GALNT2Q8NCR0 500 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 ZMIZ2Q8NF64 920 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms