RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 EGFLAMQ63HQ2 1017 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 NET1Q7Z628 596 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 BRSK2Q8IWQ3 736 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 FAR2Q96K12 515 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 FBXL18Q96ME1 805 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 FAM161BQ96MY7 647 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 UQCC2Q9BRT2 126 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 ZBED2Q9BTP6 218 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 DBNDD1Q9H9R9 158 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 DDX56Q9NY93 547 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 NKIRAS1Q9NYS0 192 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PLK2Q9NYY3 685 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 VAV3Q9UKW4 847 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PPM1HQ9ULR3 514 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PCDHAC2Q9Y5I4 1007 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 K7ENM7 598 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 KIAA0391O15091 583 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 EIF3DO15371 548 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 SGTAO43765 313 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PHF2O75151 1096 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 BMP3P12645 472 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 CRKP46108 304 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 ABCB5Q2M3G0 1257 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 CRY2Q49AN0 593 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 APOBEC3HQ6NTF7 200 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 TUBA3EQ6PEY2 450 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 MTDHQ86UE4 582 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PLPP6Q8IY26 295 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 C12orf50Q8NA57 414 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 DNAJC18Q9H819 358 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 SACM1LQ9NTJ5 587 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 ZDHHC18Q9NUE0 388 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 NYAP2Q9P242 653 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PI4KBQ9UBF8 816 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 NCANO14594 1321 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 EMSYQ7Z589 1322 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 RPTORQ8N122 1335 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 CHRNA3P32297 505 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 RPL21P46778 160 aaKnown RBP12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 BFSP1Q12934 665 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 DNAJC3Q13217 504 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 STK11Q15831 433 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 BTBD8Q5XKL5 378 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 ZNF598Q86UK7 904 aaKnown RBP12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 GALNT4Q8N4A0 578 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 DPF3Q92784 378 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 CCDC138Q96M89 665 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 ACAP3Q96P50 834 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 MKNK1Q9BUB5 465 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 HMGXB4Q9UGU5 601 aa12.71□□□□□ -0.37
SMARCA4-217ENST00000591595 MIF4GDA9UHW6 222 aaKnown RBP12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 ITM2AO43736 263 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 SNX2O60749 519 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 SPAG7O75391 227 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 SLITRK3O94933 977 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 ACSL3O95573 720 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 COMTP21964 271 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 ATP5DP30049 168 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 PGM1P36871 562 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 CYP2A13Q16696 494 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 FBXL19Q6PCT2 694 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 ZNF720Q7Z2F6 126 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 HACE1Q8IYU2 909 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 PPM1KQ8N3J5 372 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 ATP6V0D2Q8N8Y2 350 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 DDI1Q8WTU0 396 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 C10orf82Q8WW14 230 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 HPS1Q92902 700 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 KLHL25Q9H0H3 589 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 PARP2Q9UGN5 583 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 NENFQ9UMX5 172 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 SCINQ9Y6U3 715 aa12.71□□□□□ -0.38
SMARCA4-217ENST00000591595 PODXLO00592 558 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 GH2P01242 217 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 P4HA1P13674 534 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 GPC5P78333 572 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 IRF5Q13568 498 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 CLUL1Q15846 466 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 LONRF1Q17RB8 773 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 ZNF829Q3KNS6 432 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 C6orf163Q5TEZ5 329 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 PAOXQ6QHF9 649 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 NPLOC4Q8TAT6 608 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 ALOX15BO15296 676 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 GYS1P13807 737 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 NR1H2P55055 460 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 IL9RQ01113 521 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 NIPAL4Q0D2K0 466 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 NCOA4Q13772 614 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 KYNUQ16719 465 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 BBS9Q3SYG4 887 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 NANOGP8Q6NSW7 305 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 NSMFQ6X4W1 530 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 C1orf186Q6ZWK4 172 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 PRELID2Q8N945 189 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 SGF29Q96ES7 293 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 BTBD6Q96KE9 485 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 NACC1Q96RE7 527 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 C12orf10Q9HB07 376 aa12.7□□□□□ -0.38
SMARCA4-217ENST00000591595 TMOD2Q9NZR1 351 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms