RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ANXA13P27216 316 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 ADSSP30520 456 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 GJA4P35212 333 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 MPLP40238 635 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 MAGEA11P43364 429 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 PXNP49023 591 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-226ENST00000591534 EPHA4P54764 986 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 PSMD2Q13200 908 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 NAA30Q147X3 362 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-226ENST00000591534 DDR2Q16832 855 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 WDR44Q5JSH3 913 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 STPG1Q5TH74 334 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 DAB2IPQ5VWQ8 1189 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 TRIM68Q6AZZ1 485 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 VSTM1Q6UX27 236 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 CRELD2Q6UXH1 353 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-226ENST00000591534 TMEM150AQ86TG1 271 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 KBTBD6Q86V97 674 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 SCN4BQ8IWT1 228 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 CCDC65Q8IXS2 484 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 EFCAB13Q8IY85 973 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 ADGRF2Q8IZF7 708 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 C1orf127Q8N9H9 656 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 TTC16Q8NEE8 873 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 NOC3LQ8WTT2 800 aaKnown RBP10.08□□□□□ -0.8
BRCA1-226ENST00000591534 KIAA1586Q9HCI6 787 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 TRPM5Q9NZQ8 1165 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 MAGEC2Q9UBF1 373 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-226ENST00000591534 FBXO2Q9UK22 296 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-226ENST00000591534 GTF3C4Q9UKN8 822 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 L1RE1Q9UN81 338 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 SRPRBQ9Y5M8 271 aaKnown RBP10.08□□□□□ -0.8
BRCA1-226ENST00000591534 TICRRQ7Z2Z1 1910 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 A0A087X0B3 334 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 ZNF233A6NK53 670 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 TISP43B9A030 160 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 SLC9A3R1O14745 358 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-226ENST00000591534 ALDH1A2O94788 518 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 LETM1O95202 739 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-226ENST00000591534 YEATS4O95619 227 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 ARSAP15289 507 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 TCF3P15923 654 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 GRIK1P39086 918 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 STAT6P42226 847 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 CDR1P51861 262 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 DMC1Q14565 340 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 SF3A2Q15428 464 aaKnown RBP10.07□□□□□ -0.8
BRCA1-226ENST00000591534 ZNF77Q15935 545 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 DUOXA2Q1HG44 320 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 PLK5Q496M5 336 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 PREPLQ4J6C6 727 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-226ENST00000591534 LMBRD2Q68DH5 695 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-226ENST00000591534 RNF43Q68DV7 783 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 GPD1LQ8N335 351 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 TSTD1Q8NFU3 115 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 RPLP0P6Q8NHW5 317 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 SAAL1Q96ER3 474 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 SPATA17Q96L03 361 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 STRA6Q9BX79 667 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 TMLHEQ9NVH6 421 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 C2orf42Q9NWW7 574 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 TOR4AQ9NXH8 423 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 CDH9Q9ULB4 789 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 ARHGAP26Q9UNA1 814 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 USP3Q9Y6I4 520 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 COL4A2P08572 1712 aa10.07□□□□□ -0.8
BRCA1-226ENST00000591534 ANK1P16157 1881 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 OTOL1A6NHN0 477 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 MYMKA6NI61 221 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 SOWAHDA6NJG2 315 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 GABRDO14764 452 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 PRPF6O94906 941 aaKnown RBP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 CAVIN2O95810 425 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 FAM163BP0C2L3 166 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 ACAT1P24752 427 aaKnown RBP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 GBP1P32455 592 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 DPP6P42658 865 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 GPR15P49685 360 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 DGKEP52429 567 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 UBE2HP62256 183 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 SHC2P98077 582 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 RELBQ01201 579 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 AMPD3Q01432 767 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 CREB5Q02930 508 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 ZNF211Q13398 564 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 BYSLQ13895 437 aaKnown RBP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 FOXD4L6Q3SYB3 417 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 FOXD4L3Q6VB84 417 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 DENND5BQ6ZUT9 1274 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 DDX42Q86XP3 938 aaKnown RBP eCLIP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 SH3RF2Q8TEC5 729 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 CHFRQ96EP1 664 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 HPDLQ96IR7 371 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 SPATA32Q96LK8 384 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 HHIPQ96QV1 700 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 SYT15Q9BQS2 421 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 LSM14BQ9BX40 385 aaKnown RBP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 SNX25Q9H3E2 840 aa10.06□□□□□ -0.8
BRCA1-226ENST00000591534 ZNF395Q9H8N7 513 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-226ENST00000591534 PANK4Q9NVE7 773 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms