RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TRPM5Q9NZQ8 1165 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 CFAP45Q9UL16 551 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 PCDHA7Q9UN72 937 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 PCDHGA5Q9Y5G8 931 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 WNT6Q9Y6F9 365 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 SPAG17Q6Q759 2223 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 SDK1Q7Z5N4 2213 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 PTPRDP23468 1912 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 A0A0A0MRY4 1105 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.08□□□□□ -0.64
VPS4B-207ENST00000591519 TM4SF5O14894 197 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 CLIC2O15247 247 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 GDF9O60383 454 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 EPN2O95208 641 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 ZNF806P0C7X5 589 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 DLATP10515 647 aaKnown RBP11.08□□□□□ -0.64
VPS4B-207ENST00000591519 ANXA13P27216 316 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 ANP32AP39687 249 aaKnown RBP11.08□□□□□ -0.64
VPS4B-207ENST00000591519 LIMK1P53667 647 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 KRT85P78386 507 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 CYP27A1Q02318 531 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 KCNB1Q14721 858 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 KNOP1Q1ED39 458 aaKnown RBP11.08□□□□□ -0.64
VPS4B-207ENST00000591519 NAIF1Q69YI7 327 aaPredicted RBP11.08□□□□□ -0.64
VPS4B-207ENST00000591519 OR6B3Q8NGW1 331 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 SPSB2Q99619 263 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 DMAC2Q9NW81 257 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 RCOR1Q9UKL0 485 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 SPTBN2O15020 2390 aa11.08□□□□□ -0.64
VPS4B-207ENST00000591519 EML5Q05BV3 1969 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 F8VP50 259 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 K7EQS6 105 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 LEFTY2O00292 366 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 AXIN1O15169 862 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 NFATC1O95644 943 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 OAS1P00973 400 aaKnown RBP11.07□□□□□ -0.64
VPS4B-207ENST00000591519 ADRB1P08588 477 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 OPRD1P41143 372 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 PXNP49023 591 aaPredicted RBP11.07□□□□□ -0.64
VPS4B-207ENST00000591519 CYP2J2P51589 502 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 AP3M2P53677 418 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 MYL6P60660 151 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 TNNC1P63316 161 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 TAF10Q12962 218 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 PSMD2Q13200 908 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 GAB4Q2WGN9 574 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 MDH1BQ5I0G3 518 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 SNX30Q5VWJ9 437 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 TDRD10Q5VZ19 366 aaKnown RBP11.07□□□□□ -0.64
VPS4B-207ENST00000591519 RESP18Q5W5W9 173 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 KBTBD6Q86V97 674 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 SLC9A9Q8IVB4 645 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 NELFCDQ8IXH7 590 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 RPLP0P6Q8NHW5 317 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 GOLGA5Q8TBA6 731 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 PARD3BQ8TEW8 1205 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 DDX1Q92499 740 aaKnown RBP11.07□□□□□ -0.64
VPS4B-207ENST00000591519 SYAP1Q96A49 352 aaPredicted RBP11.07□□□□□ -0.64
VPS4B-207ENST00000591519 B3GNT5Q9BYG0 378 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 ELOVL4Q9GZR5 314 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 SLC39A2Q9NP94 309 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 TMEM30AQ9NV96 361 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 POLR3BQ9NW08 1133 aaPredicted RBP11.07□□□□□ -0.64
VPS4B-207ENST00000591519 FAM13BQ9NYF5 915 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 IL37Q9NZH6 218 aa11.07□□□□□ -0.64
VPS4B-207ENST00000591519 A8MXQ7 604 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 SLC9A3R1O14745 358 aaPredicted RBP11.06□□□□□ -0.64
VPS4B-207ENST00000591519 GPR37O15354 613 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 KLRC4O43908 158 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 EXOC3O60645 756 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 APBB3O95704 486 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 C4BPAP04003 597 aaKnown RBP11.06□□□□□ -0.64
VPS4B-207ENST00000591519 SLFN14P0C7P3 912 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 CCDC192P0DO97 292 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 CASP1P29466 404 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 CACNA2D1P54289 1103 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 NUCB2P80303 420 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 TRPC3Q13507 836 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 CUL4BQ13620 913 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 DMC1Q14565 340 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 PLK5Q496M5 336 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 PAQR9Q6ZVX9 377 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 NUP93Q8N1F7 819 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 B3GALNT2Q8NCR0 500 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 PLEKHO2Q8TD55 490 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 USP33Q8TEY7 942 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 OVCA2Q8WZ82 227 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 ACDQ96AP0 544 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 SLITRK1Q96PX8 696 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 DUSP9Q99956 384 aaKnown RBP11.06□□□□□ -0.64
VPS4B-207ENST00000591519 DUSP15Q9H1R2 295 aaPredicted RBP11.06□□□□□ -0.64
VPS4B-207ENST00000591519 BLZF1Q9H2G9 400 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 ARRDC1-AS1Q9H2J1 176 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 DPEP3Q9H4B8 488 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 COMMD8Q9NX08 183 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 ATP6V1DQ9Y5K8 247 aa11.06□□□□□ -0.64
VPS4B-207ENST00000591519 HELZP42694 1942 aaKnown RBP11.05□□□□□ -0.64
VPS4B-207ENST00000591519 FAM92AA1XBS5 289 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 TNFRSF10BO14763 440 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 RTN3O95197 1032 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms