RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 ATG16L1Q676U5 607 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 RFWD3Q6PCD5 774 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 DSTYKQ6XUX3 929 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 MCUQ8NE86 351 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 FAM111AQ96PZ2 611 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 TCHPQ9BT92 498 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 USP29Q9HBJ7 922 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 PICK1Q9NRD5 415 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 METTL5Q9NRN9 209 aaKnown RBP12.9□□□□□ -0.34
PDE4A-207ENST00000590407 NMRK1Q9NWW6 199 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 HOXC10Q9NYD6 342 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 TAS2R1Q9NYW7 299 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 PLLPQ9Y342 182 aa12.9□□□□□ -0.34
PDE4A-207ENST00000590407 BCLAF3A2AJT9 711 aaKnown RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 CAPN14A8MX76 684 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 GOLGA8RI6L899 631 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 FCHO1O14526 889 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 COPEO14579 308 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ECM2O94769 699 aaPredicted RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 PSMG1O95456 288 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 PYGBP11216 843 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ESRRAP11474 423 aaPredicted RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 CD19P15391 556 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 BGNP21810 368 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 KCNA3P22001 575 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 UBA1P22314 1058 aaKnown RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ATICP31939 592 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 PTPN11Q06124 597 aaPredicted RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 LAMTOR4Q0VGL1 99 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 PDK2Q15119 407 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ACSBG2Q5FVE4 666 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ZNF667Q5HYK9 610 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 DARS2Q6PI48 645 aaKnown RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 CYP4V2Q6ZWL3 525 aaPredicted RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ZBTB33Q86T24 672 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 VPS52Q8N1B4 723 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 TEKT4Q8WW24 435 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 SEPT1Q8WYJ6 367 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 MCUR1Q96AQ8 359 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 SRPK1Q96SB4 655 aaKnown RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 SDCBP2Q9H190 292 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 C10orf88Q9H8K7 445 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 POPDC2Q9HBU9 364 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 DNAJB4Q9UDY4 337 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ANK1P16157 1881 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 EP400Q96L91 3159 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 I3L4J1 428 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ACKR2O00590 384 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 DPYSL4O14531 572 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 BIRC5O15392 142 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 TOMM70O94826 608 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 MYL2P10916 166 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 SKIP12755 728 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 CALRP27797 417 aaKnown RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 MAGEA3P43357 314 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 YWHAGP61981 247 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 YWHAZP63104 245 aaKnown RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 AP1B1Q10567 949 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 RCN1Q15293 331 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 CCDC6Q16204 474 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 MUM1Q2TAK8 710 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 NBPF20Q3BBV1 942 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 STXBP5Q5T5C0 1151 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 SNX30Q5VWJ9 437 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 SCARA5Q6ZMJ2 495 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 TIFABQ6ZNK6 161 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 RINLQ6ZS11 566 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 CYS1Q717R9 158 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 TMPRSS6Q8IU80 811 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 MAP7D3Q8IWC1 876 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 TTC39CQ8N584 583 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 AFG1LQ8WV93 481 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 FAF2Q96CS3 445 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 RNF157Q96PX1 679 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 KLF6Q99612 283 aaPredicted RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 SIKE1Q9BRV8 207 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 FAM167BQ9BTA0 163 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ADAM33Q9BZ11 813 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 IQCGQ9H095 443 aaKnown RBP12.89□□□□□ -0.35
PDE4A-207ENST00000590407 FZD8Q9H461 694 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 ARHGEF4Q9NR80 690 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 TJP2Q9UDY2 1190 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 SIX4Q9UIU6 781 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
PDE4A-207ENST00000590407 C2CD4BA6NLJ0 364 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 SPDYE16A6NNV3 312 aaPredicted RBP12.88□□□□□ -0.35
PDE4A-207ENST00000590407 CILPO75339 1184 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 LGR5O75473 907 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 MICAL2O94851 1124 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 FESP07332 822 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 VDRP11473 427 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 GPD1P21695 349 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 GPD2P43304 727 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 PSMC4P43686 418 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 SERPINB9P50453 376 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 HMGCS2P54868 508 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms