RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 ROR1Q01973 937 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 CKAP4Q07065 602 aaKnown RBP18.29■□□□□ 0.52
CXXC1-212ENST00000589940 DCAF12L1Q5VU92 463 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 RHOT1Q8IXI2 618 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 SCML4Q8N228 414 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 NDRG1Q92597 394 aaKnown RBP18.29■□□□□ 0.52
CXXC1-212ENST00000589940 FAM149B1Q96BN6 582 aa18.29■□□□□ 0.52
CXXC1-212ENST00000589940 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.29■□□□□ 0.52
CXXC1-212ENST00000589940 WDR27A2RRH5 827 aa18.28■□□□□ 0.52
CXXC1-212ENST00000589940 TNFRSF10BO14763 440 aa18.28■□□□□ 0.52
CXXC1-212ENST00000589940 VNN2O95498 520 aa18.28■□□□□ 0.52
CXXC1-212ENST00000589940 USP17L7P0C7H9 530 aa18.28■□□□□ 0.52
CXXC1-212ENST00000589940 SDC4P31431 198 aa18.28■□□□□ 0.52
CXXC1-212ENST00000589940 SSR1P43307 286 aaKnown RBP18.28■□□□□ 0.52
CXXC1-212ENST00000589940 TAS2R40P59535 323 aa18.28■□□□□ 0.52
CXXC1-212ENST00000589940 YWHAZP63104 245 aaKnown RBP18.28■□□□□ 0.52
CXXC1-212ENST00000589940 GPR65Q8IYL9 337 aa18.28■□□□□ 0.52
CXXC1-212ENST00000589940 MNS1Q8NEH6 495 aa18.28■□□□□ 0.52
CXXC1-212ENST00000589940 CLSTN3Q9BQT9 956 aa18.28■□□□□ 0.52
CXXC1-212ENST00000589940 USP3Q9Y6I4 520 aa18.28■□□□□ 0.52
CXXC1-212ENST00000589940 LRCH4O75427 683 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 MAGEA10P43363 369 aaPredicted RBP18.27■□□□□ 0.52
CXXC1-212ENST00000589940 SLC5A3P53794 718 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 RWDD2BP57060 319 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 CCDC14Q49A88 953 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 C9orf50Q5SZB4 431 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 CCDC181Q5TID7 509 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 LRRC38Q5VT99 294 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 PM20D1Q6GTS8 502 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 TTC9BQ8N6N2 239 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 KLHL23Q8NBE8 558 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 IRGQQ8WZA9 623 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 MS4A14Q96JA4 679 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 CFAP57Q96MR6 1250 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 CEP290O15078 2479 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 CEP104O60308 925 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 DAB1O75553 588 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 RNF8O76064 485 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 DESP17661 470 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 PTPN9P43378 593 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 DDR2Q16832 855 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 ARFGAP1Q8N6T3 406 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 MYRIPQ8NFW9 859 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 POPDC2Q9HBU9 364 aa18.27■□□□□ 0.52
CXXC1-212ENST00000589940 MRPL17Q9NRX2 175 aaKnown RBP18.27■□□□□ 0.52
CXXC1-212ENST00000589940 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.27■□□□□ 0.52
CXXC1-212ENST00000589940 PATJQ8NI35 1801 aa18.27■□□□□ 0.51
CXXC1-212ENST00000589940 YJEFN3A6XGL0 299 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 E7ENQ6 273 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 PDE2AO00408 941 aaPredicted RBP18.26■□□□□ 0.51
CXXC1-212ENST00000589940 TCF4P15884 667 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 PCK1P35558 622 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 MATKP42679 507 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 PAFAH1B1P43034 410 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 C15orf59Q2T9L4 293 aaPredicted RBP18.26■□□□□ 0.51
CXXC1-212ENST00000589940 RASGEF1CQ8N431 466 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 SCAMP5Q8TAC9 235 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 ACTRT1Q8TDG2 376 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 RNPC3Q96LT9 517 aaKnown RBP18.26■□□□□ 0.51
CXXC1-212ENST00000589940 SLC2A13Q96QE2 648 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 DDX23Q9BUQ8 820 aaKnown RBP18.26■□□□□ 0.51
CXXC1-212ENST00000589940 ZBP1Q9H171 429 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 CRISPLD1Q9H336 500 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 SLC27A5Q9Y2P5 690 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 HAPLN1P10915 354 aaPredicted RBP18.26■□□□□ 0.51
CXXC1-212ENST00000589940 BMPR1AP36894 532 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 GPR15P49685 360 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 DUSP4Q13115 394 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 MGAT5BQ3V5L5 792 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 BHLHA9Q7RTU4 235 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 LRRN4CLQ8ND94 238 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 SEPT5Q99719 369 aaPredicted RBP18.26■□□□□ 0.51
CXXC1-212ENST00000589940 C11orf84Q9BUA3 381 aaPredicted RBP18.26■□□□□ 0.51
CXXC1-212ENST00000589940 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.26■□□□□ 0.51
CXXC1-212ENST00000589940 EHD2Q9NZN4 543 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 AFF4Q9UHB7 1163 aaKnown RBP18.26■□□□□ 0.51
CXXC1-212ENST00000589940 RWDD3Q9Y3V2 267 aa18.26■□□□□ 0.51
CXXC1-212ENST00000589940 CTAGE15A4D2H0 777 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 LINC01553A4QN01 128 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 CTAGE8P0CG41 777 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 CTSAP10619 480 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 DNAJB2P25686 324 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 CTNNB1P35222 781 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 ATP11AP98196 1134 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 SLC25A11Q02978 314 aaKnown RBP18.25■□□□□ 0.51
CXXC1-212ENST00000589940 CREMQ03060 361 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 ZNF211Q13398 564 aaPredicted RBP18.25■□□□□ 0.51
CXXC1-212ENST00000589940 HADHQ16836 314 aaKnown RBP18.25■□□□□ 0.51
CXXC1-212ENST00000589940 SH3PXD2AQ5TCZ1 1133 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 TPGS2Q68CL5 300 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 HFE2Q6ZVN8 426 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 ZNF572Q7Z3I7 529 aaPredicted RBP18.25■□□□□ 0.51
CXXC1-212ENST00000589940 POLNQ7Z5Q5 900 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 CTAGE6Q86UF2 777 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 CTAGE4Q8IX94 777 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 KATNAL2Q8IYT4 538 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 DEFB106AQ8N104 65 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 NUP93Q8N1F7 819 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 ZNF461Q8TAF7 563 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 SMARCAL1Q9NZC9 954 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms