RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	TTC3	P53804	2025 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318		F8W810	466 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318		I3L4J1	428 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	FSCN2	O14926	492 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	PAPSS1	O43252	624 aa	Predicted RBP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	DDHD2	O94830	711 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	PSMA2	P25787	234 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	BRCC3	P46736	316 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	ATN1	P54259	1190 aa	Predicted RBP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	BIRC2	Q13490	618 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	ATP13A4	Q4VNC1	1196 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	PAN2	Q504Q3	1202 aa	Known RBP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	LRRC38	Q5VT99	294 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	GLB1L	Q6UWU2	654 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	SLC39A5	Q6ZMH5	540 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	ANKS1B	Q7Z6G8	1248 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	ZNF280B	Q86YH2	543 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	ZNF483	Q8TF39	744 aa	Predicted RBP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	RTP3	Q9BQQ7	232 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	SLITRK6	Q9H5Y7	841 aa		16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	16.13	■□□□□ 0.17
DDX39A-209	ENST00000589318		M0QZQ0	153 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	ENPP3	O14638	875 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	LRCH4	O75427	683 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	HEXIM1	O94992	359 aa	Known RBP	16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	CYP11A1	P05108	521 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	LHX1	P48742	406 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	OR6B2	Q6IFH4	312 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	CACNA2D3	Q8IZS8	1091 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	B3GNT5	Q9BYG0	378 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	MIS12	Q9H081	205 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	TMEM161A	Q9NX61	479 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	AMACR	Q9UHK6	382 aa		16.12	■□□□□ 0.17
DDX39A-209	ENST00000589318	C2CD4B	A6NLJ0	364 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	CLDN5	O00501	218 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	RARA	P10276	462 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	SCTR	P47872	440 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	SLC25A11	Q02978	314 aa	Known RBP	16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	FAAP100	Q0VG06	881 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	RBBP5	Q15291	538 aa	Known RBP	16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	LLGL1	Q15334	1064 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	TAF5	Q15542	800 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	CYP1B1	Q16678	543 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	MDH1B	Q5I0G3	518 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	NOMO2	Q5JPE7	1267 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	SCUBE3	Q8IX30	993 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	EXD1	Q8NHP7	514 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	HASPIN	Q8TF76	798 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	ZNF333	Q96JL9	665 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	ANKRD27	Q96NW4	1050 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	SYT15	Q9BQS2	421 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	DNAI2	Q9GZS0	605 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	CYLD	Q9NQC7	956 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	PTPRD	P23468	1912 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	CFAP73	A6NFT4	308 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	TRAPPC3	O43617	180 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	BEST1	O76090	585 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	ODC1	P11926	461 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	GCK	P35557	465 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	GJC1	P36383	396 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	FLT3	P36888	993 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	SLC6A3	Q01959	620 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	KCTD19	Q17RG1	926 aa	Predicted RBP	16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	DCLRE1A	Q6PJP8	1040 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	CRIPAK	Q8N1N5	446 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	RSPH1	Q8WYR4	309 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	PLVAP	Q9BX97	442 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	DUSP16	Q9BY84	665 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	ELAC1	Q9H777	363 aa	Known RBP	16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	TMBIM4	Q9HC24	238 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	TBC1D13	Q9NVG8	400 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	NLRC5	Q86WI3	1866 aa		16.11	■□□□□ 0.17
DDX39A-209	ENST00000589318	MKI67	P46013	3256 aa	Known RBP	16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	GOLGA6L10	A0A0M3HER8	536 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	MYBPHL	A2RUH7	354 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	XPO1	O14980	1071 aa	Known RBP	16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	PHF2	O75151	1096 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	COL6A1	P12109	1028 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	IL1R2	P27930	398 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	ZNF143	P52747	638 aa	Predicted RBP	16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	PLCB3	Q01970	1234 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	KLF1	Q13351	362 aa	Predicted RBP	16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	GKAP1	Q5VSY0	366 aa	Predicted RBP	16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	TTC27	Q6P3X3	843 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	MICAL3	Q7RTP6	2002 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	APLF	Q8IW19	511 aa	Predicted RBP	16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	COLGALT2	Q8IYK4	626 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	SH2D3C	Q8N5H7	860 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	SPATA18	Q8TC71	538 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	DIS3L	Q8TF46	1054 aa	Known RBP	16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	CLEC4C	Q8WTT0	213 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	SCLY	Q96I15	445 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	SUSD3	Q96L08	255 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	HSFY1	Q96LI6	401 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	KLHL11	Q9NVR0	708 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	ETAA1	Q9NY74	926 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	CDH9	Q9ULB4	789 aa		16.1	■□□□□ 0.17
DDX39A-209	ENST00000589318	ESYT3	A0FGR9	886 aa		16.09	■□□□□ 0.17

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms