RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-208	ENST00000589216	GNA14	O95837	355 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	ZDHHC11B	P0C7U3	371 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	HDC	P19113	662 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	GOLGA7B	Q2TAP0	167 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	ARHGAP17	Q68EM7	881 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	GJB7	Q6PEY0	223 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216		Q6ZS52	159 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	FAXDC2	Q96IV6	333 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	SHD	Q96IW2	340 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	HEXIM2	Q96MH2	286 aa	Known RBP	10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	DUSP16	Q9BY84	665 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	KCNH6	Q9H252	994 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	NMUR1	Q9HB89	426 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	RBM12	Q9NTZ6	932 aa	Known RBP	10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	ZMYM5	Q9UJ78	669 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	TSPAN16	Q9UKR8	245 aa		10.43	□□□□□ -0.74
PTPN2-208	ENST00000589216	SOBP	A7XYQ1	873 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216		O00370	1275 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	MDM4	O15151	490 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	P4HA2	O15460	535 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	CCDC192	P0DO97	292 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	CD19	P15391	556 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	TCF3	P15923	654 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	TBXAS1	P24557	533 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	BRD2	P25440	801 aa	Known RBP	10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	HOXC13	P31276	330 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	KIF11	P52732	1056 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	ZNF132	P52740	706 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	PTPN5	P54829	565 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	SLC7A9	P82251	487 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	GAS6	Q14393	721 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	ANGPT1	Q15389	498 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	GAB4	Q2WGN9	574 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	EML3	Q32P44	896 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	ITPRIPL2	Q3MIP1	535 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	MIIP	Q5JXC2	388 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	TRIM65	Q6PJ69	517 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	TMEM270	Q6UE05	265 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	ZNF852	Q6ZMS4	543 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	BHLHA9	Q7RTU4	235 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	SCD5	Q86SK9	330 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	PIGZ	Q86VD9	579 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	PDZD8	Q8NEN9	1154 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	CSGALNACT1	Q8TDX6	532 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	OVCA2	Q8WZ82	227 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	FAM3C	Q92520	227 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	CLDN23	Q96B33	292 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	FAM122A	Q96E09	287 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	EHD2	Q9NZN4	543 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	CFAP97	Q9P2B7	532 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	NUDT5	Q9UKK9	219 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	ZNF292	O60281	2723 aa		10.42	□□□□□ -0.74
PTPN2-208	ENST00000589216	USP34	Q70CQ2	3546 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	RIF1	Q5UIP0	2472 aa	Known RBP	10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216		A0A1W2PQH9	124 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	GABBR2	O75899	941 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	TBX18	O95935	607 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	ATXN8OS	P0DMR3	200 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	MBL2	P11226	248 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	CHRNB1	P11230	501 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	SLC9A1	P19634	815 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	ERCC5	P28715	1186 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	KPNA1	P52294	538 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	PLCB2	Q00722	1185 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	PDE4C	Q08493	712 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	RUNX3	Q13761	415 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	PON2	Q15165	354 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	PKDCC	Q504Y2	493 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	SGO2	Q562F6	1265 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	SNX30	Q5VWJ9	437 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	PKN3	Q6P5Z2	889 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	CREBRF	Q8IUR6	639 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	TTC39C	Q8N584	583 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	EHBP1	Q8NDI1	1231 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	OSCP1	Q8WVF1	389 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	NDRG1	Q92597	394 aa	Known RBP	10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	EZH1	Q92800	747 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	OSBPL6	Q9BZF3	934 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	LINC00597	Q9H2U6	94 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	THAP9	Q9H5L6	903 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	PNPLA8	Q9NP80	782 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	SIX2	Q9NPC8	291 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	ACP6	Q9NPH0	428 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	SAMSN1	Q9NSI8	373 aa	Known RBP	10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	C2orf42	Q9NWW7	574 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	DUS2	Q9NX74	493 aa	Known RBP	10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	TMEM63C	Q9P1W3	806 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	SCML2	Q9UQR0	700 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	PCDHB4	Q9Y5E5	795 aa		10.41	□□□□□ -0.74
PTPN2-208	ENST00000589216	OTOGL	Q3ZCN5	2332 aa		10.4	□□□□□ -0.74
PTPN2-208	ENST00000589216	EML5	Q05BV3	1969 aa		10.4	□□□□□ -0.74
PTPN2-208	ENST00000589216	ANTXRL	A6NF34	631 aa		10.4	□□□□□ -0.74
PTPN2-208	ENST00000589216	BECN2	A8MW95	431 aa		10.4	□□□□□ -0.74
PTPN2-208	ENST00000589216	MAN2B1	O00754	1011 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms