RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 CTCFP49711 727 aaPredicted RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 ARL4CP56559 192 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 DPYSL3Q14195 570 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 TAF5Q15542 800 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 TRNP1Q6NT89 227 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 CPLX4Q7Z7G2 160 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 HACE1Q8IYU2 909 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 SPATA18Q8TC71 538 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 FAM172AQ8WUF8 416 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 ATXN2LQ8WWM7 1075 aaKnown RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 PRCCQ92733 491 aaPredicted RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 CAPNS2Q96L46 248 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 HSFY1Q96LI6 401 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 RNF157Q96PX1 679 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 SAE1Q9UBE0 346 aaPredicted RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 NME7Q9Y5B8 376 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 CASP8AP2Q9UKL3 1982 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 TULP2O00295 520 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 MDM4O15151 490 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 PAPSS1O43252 624 aaPredicted RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 TGM2P21980 687 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 PTPN9P43378 593 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 RPL34P49207 117 aaKnown RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 SLC8A3P57103 927 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 IRX5P78411 483 aaPredicted RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 ATP11AP98196 1134 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 ROR1Q01973 937 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 NOMO1Q15155 1222 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 HIF1AQ16665 826 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 SH3PXD2AQ5TCZ1 1133 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 TWF2Q6IBS0 349 aaKnown RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 SCYL2Q6P3W7 929 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 CYP4V2Q6ZWL3 525 aaPredicted RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 LIMS2Q7Z4I7 341 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 RSPH3Q86UC2 560 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 SCUBE3Q8IX30 993 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 TOP6BLQ8N6T0 577 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 KBTBD7Q8WVZ9 684 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 MTG1Q9BT17 334 aaPredicted RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 DPEP3Q9H4B8 488 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 NGRNQ9NPE2 291 aaKnown RBP15.95■□□□□ 0.14
MBD1-217ENST00000588937 TRIP12Q14669 1992 aaPredicted RBP15.94■□□□□ 0.14
MBD1-217ENST00000588937 RPLP2P05387 115 aaKnown RBP15.94■□□□□ 0.14
MBD1-217ENST00000588937 PDGFRBP09619 1106 aa15.94■□□□□ 0.14
MBD1-217ENST00000588937 WARSP23381 471 aaKnown RBP15.94■□□□□ 0.14
MBD1-217ENST00000588937 LRPAP1P30533 357 aa15.94■□□□□ 0.14
MBD1-217ENST00000588937 PHBP35232 272 aa15.94■□□□□ 0.14
MBD1-217ENST00000588937 RPL22P35268 128 aaKnown RBP15.94■□□□□ 0.14
MBD1-217ENST00000588937 CCDC142Q17RM4 750 aa15.94■□□□□ 0.14
MBD1-217ENST00000588937 GKAP1Q5VSY0 366 aaPredicted RBP15.94■□□□□ 0.14
MBD1-217ENST00000588937 DARS2Q6PI48 645 aaKnown RBP15.94■□□□□ 0.14
MBD1-217ENST00000588937 SLC26A9Q7LBE3 791 aa15.94■□□□□ 0.14
MBD1-217ENST00000588937 YTHDF3Q7Z739 585 aaKnown RBP15.94■□□□□ 0.14
MBD1-217ENST00000588937 TDRPQ86YL5 185 aa15.94■□□□□ 0.14
MBD1-217ENST00000588937 ADGRF2Q8IZF7 708 aa15.94■□□□□ 0.14
MBD1-217ENST00000588937 SMG8Q8ND04 991 aaKnown RBP15.94■□□□□ 0.14
MBD1-217ENST00000588937 PIWIL1Q96J94 861 aaKnown RBP15.94■□□□□ 0.14
MBD1-217ENST00000588937 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.93■□□□□ 0.14
MBD1-217ENST00000588937 EXOC1LA0A1B0GW35 172 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 CFAP69A5D8W1 941 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 APOL1O14791 398 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 ADORA2BP29275 332 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 MAP2K2P36507 400 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 MRPS6P82932 125 aaKnown RBP15.93■□□□□ 0.14
MBD1-217ENST00000588937 PDIA2Q13087 525 aaKnown RBP15.93■□□□□ 0.14
MBD1-217ENST00000588937 CCDC38Q502W7 563 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 TADA2BQ86TJ2 420 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 UNC45BQ8IWX7 931 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 ZBED8Q8IZ13 594 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 NAT8LQ8N9F0 302 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 KHSRPQ92945 711 aaKnown RBP eCLIP15.93■□□□□ 0.14
MBD1-217ENST00000588937 ZNF670Q9BS34 389 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 NSRP1Q9H0G5 558 aaKnown RBP15.93■□□□□ 0.14
MBD1-217ENST00000588937 RNF39Q9H2S5 420 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 SPC25Q9HBM1 224 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 SLC38A7Q9NVC3 462 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 NAALADL1Q9UQQ1 740 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 TRPV2Q9Y5S1 764 aa15.93■□□□□ 0.14
MBD1-217ENST00000588937 SPTLC1O15269 473 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 C6orf222P0C671 652 aaPredicted RBP15.92■□□□□ 0.14
MBD1-217ENST00000588937 FGFR1P11362 822 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 CCDC130P13994 396 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 TSHRP16473 764 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 CTGFP29279 349 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 GDF10P55107 478 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 GJA9P57773 515 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 LILRA4P59901 499 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 PPARDQ03181 441 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 MMRN1Q13201 1228 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 ANKRD20A8PQ5CZ79 823 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 PPP1R21Q6ZMI0 780 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 FAM228AQ86W67 206 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 CACNA2D3Q8IZS8 1091 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 FAM71DQ8N9W8 422 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 DYDC1Q8WWB3 177 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 CPT1BQ92523 772 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 VPS37BQ9H9H4 285 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 UBN1Q9NPG3 1134 aa15.92■□□□□ 0.14
MBD1-217ENST00000588937 H7C0C1 242 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms