RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 GPRIN1Q7Z2K8 1008 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 CPNE8Q86YQ8 564 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 ATAD1Q8NBU5 361 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 CD101Q93033 1021 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 FAM161BQ96MY7 647 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 ULBP1Q9BZM6 244 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 MRPL17Q9NRX2 175 aaKnown RBP23.35■■□□□ 1.33
ATG4D-209ENST00000588857 PLXNA4Q9HCM2 1894 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 LCHNA4D1U4 455 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 MTMR11A4FU01 709 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 C2CD4BA6NLJ0 364 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 DDX3YO15523 660 aaKnown RBP23.35■■□□□ 1.33
ATG4D-209ENST00000588857 HSF2BPO75031 334 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 RPL17P18621 184 aaKnown RBP23.35■■□□□ 1.33
ATG4D-209ENST00000588857 CTNNA2P26232 953 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 ZNF143P52747 638 aaPredicted RBP23.35■■□□□ 1.33
ATG4D-209ENST00000588857 ADCY1Q08828 1119 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 RAB30Q15771 203 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 ARCQ7LC44 396 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 COG1Q8WTW3 980 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 RXFP2Q8WXD0 754 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 KHSRPQ92945 711 aaKnown RBP eCLIP23.35■■□□□ 1.33
ATG4D-209ENST00000588857 PBKQ96KB5 322 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 CAPZA3Q96KX2 299 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 CNPY3Q9BT09 278 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 ASNSD1Q9NWL6 643 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 MSRAQ9UJ68 235 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.35■■□□□ 1.33
ATG4D-209ENST00000588857 RWDD3Q9Y3V2 267 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 GBF1Q92538 1859 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 ZNF185O15231 689 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 RNF8O76064 485 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 ZBED1O96006 694 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 CTNNA1P35221 906 aaKnown RBP23.34■■□□□ 1.33
ATG4D-209ENST00000588857 FLT3P36888 993 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 ROR1Q01973 937 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 ACAP1Q15027 740 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 CC2D1AQ6P1N0 951 aaPredicted RBP23.34■■□□□ 1.33
ATG4D-209ENST00000588857 KLHL23Q8NBE8 558 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 FAM149B1Q96BN6 582 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 C8orf48Q96LL4 319 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 CLSTN3Q9BQT9 956 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 PCDHA3Q9Y5H8 950 aa23.34■■□□□ 1.33
ATG4D-209ENST00000588857 CES2O00748 559 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 ADAM12O43184 909 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 GLI1P08151 1106 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 USP17L7P0C7H9 530 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 SDC4P31431 198 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 CTNNB1P35222 781 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 BMPR1AP36894 532 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 YWHAZP63104 245 aaKnown RBP23.33■■□□□ 1.33
ATG4D-209ENST00000588857 CCDC181Q5TID7 509 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 RHOT1Q8IXI2 618 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 GPR65Q8IYL9 337 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 NDRG1Q92597 394 aaKnown RBP23.33■■□□□ 1.33
ATG4D-209ENST00000588857 KRT35Q92764 455 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 SSX2IPQ9Y2D8 614 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 MYO16Q9Y6X6 1858 aa23.33■■□□□ 1.33
ATG4D-209ENST00000588857 WDR27A2RRH5 827 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 DPYSL4O14531 572 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 DAOAP59103 153 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 CREMQ03060 361 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 CKAP4Q07065 602 aaKnown RBP23.32■■□□□ 1.32
ATG4D-209ENST00000588857 DDR2Q16832 855 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 MGAT5BQ3V5L5 792 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 DAB2IPQ5VWQ8 1189 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 MNS1Q8NEH6 495 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 IRGQQ8WZA9 623 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 GUCD1Q96NT3 240 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 SEPT5Q99719 369 aaPredicted RBP23.32■■□□□ 1.32
ATG4D-209ENST00000588857 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.32■■□□□ 1.32
ATG4D-209ENST00000588857 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.32■■□□□ 1.32
ATG4D-209ENST00000588857 SLC27A5Q9Y2P5 690 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 PCDHA11Q9Y5I1 949 aa23.32■■□□□ 1.32
ATG4D-209ENST00000588857 LINC01553A4QN01 128 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 PSTPIP1O43586 416 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 HAPLN1P10915 354 aaPredicted RBP23.31■■□□□ 1.32
ATG4D-209ENST00000588857 PEX5P50542 639 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 SLC5A3P53794 718 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 RWDD2BP57060 319 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 DUSP4Q13115 394 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 PM20D1Q6GTS8 502 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 TRNP1Q6NT89 227 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 CREG2Q8IUH2 290 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 SCML4Q8N228 414 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 TTC9BQ8N6N2 239 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 CEP112Q8N8E3 955 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 ALG3Q92685 438 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 GOLGA1Q92805 767 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 CFAP57Q96MR6 1250 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 CARD6Q9BX69 1037 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 CARD9Q9H257 536 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 ZNF576Q9H609 170 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 RNF14Q9UBS8 474 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 YBX2Q9Y2T7 364 aaKnown RBP23.31■■□□□ 1.32
ATG4D-209ENST00000588857 TNFRSF10BO14763 440 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 CEP104O60308 925 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 DAB1O75553 588 aa23.31■■□□□ 1.32
ATG4D-209ENST00000588857 SLU7O95391 586 aaKnown RBP23.31■■□□□ 1.32
ATG4D-209ENST00000588857 CA8P35219 290 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms