RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CSRP1P21291 193 aaKnown RBP19.59■□□□□ 0.73
CCDC43-204ENST00000588687 MYL6P60660 151 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 IRX4P78413 519 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 MAP7D1Q3KQU3 841 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 WDR72Q3MJ13 1102 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 DAB2IPQ5VWQ8 1189 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 PAQR9Q6ZVX9 377 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 HS2ST1Q7LGA3 356 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 RDH13Q8NBN7 331 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 OR6B3Q8NGW1 331 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 PLEKHO2Q8TD55 490 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 RLN3Q8WXF3 142 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 SLITRK1Q96PX8 696 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 CUEDC2Q9H467 287 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 SMYD3Q9H7B4 428 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 VRTNQ9H8Y1 702 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 ZDHHC4Q9NPG8 344 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 IL37Q9NZH6 218 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 HCN2Q9UL51 889 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 FAM92AA1XBS5 289 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 TOP3BO95985 862 aaKnown RBP19.58■□□□□ 0.72
CCDC43-204ENST00000588687 ADH1CP00326 375 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 TNNI1P19237 187 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 TIE1P35590 1138 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 PTGER3P43115 390 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 TNNC1P63316 161 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 ASIC1P78348 528 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 KDSRQ06136 332 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 BMT2Q1RMZ1 405 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 LY6G5CQ5SRR4 150 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 SNX30Q5VWJ9 437 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 PEAR1Q5VY43 1037 aaPredicted RBP19.58■□□□□ 0.72
CCDC43-204ENST00000588687 TDRD10Q5VZ19 366 aaKnown RBP19.58■□□□□ 0.72
CCDC43-204ENST00000588687 SHC4Q6S5L8 630 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 UNQ6494/PRO21346Q6UXR6 183 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 DDX42Q86XP3 938 aaKnown RBP eCLIP19.58■□□□□ 0.72
CCDC43-204ENST00000588687 C12orf56Q8IXR9 622 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 WHAMMQ8TF30 809 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 OVCA2Q8WZ82 227 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 WBP2Q969T9 261 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 CCDC127Q96BQ5 260 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 INTS4Q96HW7 963 aaKnown RBP19.58■□□□□ 0.72
CCDC43-204ENST00000588687 KCNK16Q96T55 309 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 ARHGEF4Q9NR80 690 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 TMEM74BQ9NUR3 256 aa19.58■□□□□ 0.72
CCDC43-204ENST00000588687 CEP192Q8TEP8 1941 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 NBEAQ8NFP9 2946 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 E2F8A0AVK6 867 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 CLIC2O15247 247 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 HOXC11O43248 304 aaPredicted RBP19.57■□□□□ 0.72
CCDC43-204ENST00000588687 APODP05090 189 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 ZDHHC11BP0C7U3 371 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 MBL2P11226 248 aaPredicted RBP19.57■□□□□ 0.72
CCDC43-204ENST00000588687 CEACAM1P13688 526 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 YWHAQP27348 245 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 GRIA2P42262 883 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 DHPSP49366 369 aaPredicted RBP19.57■□□□□ 0.72
CCDC43-204ENST00000588687 TUBP50607 506 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 CYP2J2P51589 502 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 IFRD2Q12894 506 aaPredicted RBP19.57■□□□□ 0.72
CCDC43-204ENST00000588687 FAM35AQ86V20 835 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 NUP93Q8N1F7 819 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 XXYLT1Q8NBI6 393 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 PDZD8Q8NEN9 1154 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 SCAMP5Q8TAC9 235 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 FBXO32Q969P5 355 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 DHX58Q96C10 678 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 C7orf25Q9BPX7 421 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 ZSCAN16Q9H4T2 348 aaPredicted RBP19.57■□□□□ 0.72
CCDC43-204ENST00000588687 CD248Q9HCU0 757 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 RALYQ9UKM9 306 aaKnown RBP19.57■□□□□ 0.72
CCDC43-204ENST00000588687 ITPR1Q14643 2758 aa19.57■□□□□ 0.72
CCDC43-204ENST00000588687 A8MXQ7 604 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 GREM1O60565 184 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 PPP6R2O75170 966 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 ALDH1A2O94788 518 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 ABL1P00519 1130 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 SPINK2P20155 84 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 CASP1P29466 404 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 TNFRSF4P43489 277 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 CASP4P49662 377 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 PGFP49763 221 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 SLC5A3P53794 718 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 SNRPFP62306 86 aaKnown RBP19.56■□□□□ 0.72
CCDC43-204ENST00000588687 EOGTQ5NDL2 527 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 NELFCDQ8IXH7 590 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 ZMIZ2Q8NF64 920 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 PIGKQ92643 395 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 OTUB2Q96DC9 234 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 LRRC27Q9C0I9 530 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 SDCBP2Q9H190 292 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 CCSER2Q9H7U1 834 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 TBC1D14Q9P2M4 693 aa19.56■□□□□ 0.72
CCDC43-204ENST00000588687 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.55■□□□□ 0.72
CCDC43-204ENST00000588687 SPTLC2O15270 562 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 STX6O43752 255 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 RTN3O95197 1032 aaPredicted RBP19.55■□□□□ 0.72
CCDC43-204ENST00000588687 ATICP31939 592 aa19.55■□□□□ 0.72
CCDC43-204ENST00000588687 CDH8P55286 799 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms