RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 PTPN9P43378 593 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 TKTL1P51854 596 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 YWHAZP63104 245 aaKnown RBP11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 DEFB103AP81534 67 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 KRT17Q04695 432 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 GPR17Q13304 367 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 SLC39A12Q504Y0 691 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 BOLA3Q53S33 107 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 RAB41Q5JT25 222 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 TEX35Q5T0J7 233 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 ZFYVE27Q5T4F4 411 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 OTOP2Q7RTS6 562 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 GPR161Q8N6U8 529 aaKnown RBP11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 ALG3Q92685 438 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 KRT35Q92764 455 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 KHSRPQ92945 711 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 MS4A14Q96JA4 679 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 C8orf48Q96LL4 319 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 RNPC3Q96LT9 517 aaKnown RBP11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 LBHD1Q9BQE6 289 aaPredicted RBP11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 ZBED2Q9BTP6 218 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 TMLHEQ9NVH6 421 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 COMMD8Q9NX08 183 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 SSX2IPQ9Y2D8 614 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 INSL6Q9Y581 213 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 PCDHB12Q9Y5F1 795 aa11.01□□□□□ -0.65
CHMP1B-202ENST00000588284 PIK3R2O00459 728 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 KRIT1O00522 736 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 FSCN2O14926 492 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 TBC1D4O60343 1298 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 EFEMP2O95967 443 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 ZBED1O96006 694 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 FGGP02679 453 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 PYGMP11217 842 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 MCM3P25205 808 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 MATKP42679 507 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 OGDHQ02218 1023 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 ADIGQ0VDE8 80 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 ERCC6LQ2NKX8 1250 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 TMEM240Q5SV17 173 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 PM20D1Q6GTS8 502 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 FAM117BQ6P1L5 589 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 C16orf59Q7L2K0 433 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 BEND5Q7L4P6 421 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 C7orf61Q8IZ16 206 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 SLC39A11Q8N1S5 342 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 FIBCD1Q8N539 461 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 EMC1Q8N766 993 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 ZMIZ2Q8NF64 920 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 CCDC26Q8TAB7 109 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 PIK3R5Q8WYR1 880 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 HERVK_113Q902F9 699 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 CEP295NLQ96MC4 621 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 RUNDC3BQ96NL0 473 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 TMEM209Q96SK2 561 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 KCNK16Q96T55 309 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 SLC9A7Q96T83 725 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 RC3H2Q9HBD1 1191 aaKnown RBP11□□□□□ -0.65
CHMP1B-202ENST00000588284 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 CHST7Q9NS84 486 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 HOMER3Q9NSC5 361 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 STAP1Q9ULZ2 295 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 EFR3BQ9Y2G0 817 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 SLC4A7Q9Y6M7 1214 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 MICAL3Q7RTP6 2002 aa11□□□□□ -0.65
CHMP1B-202ENST00000588284 KIAA0100Q14667 2235 aaKnown RBP11□□□□□ -0.65
CHMP1B-202ENST00000588284 HHLA1C9JL84 531 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 CAPN9O14815 690 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 SNPHO15079 494 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 PRPSAP2O60256 369 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 LRCH4O75427 683 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 DAB1O75553 588 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 GRAP2O75791 330 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 GJB5O95377 273 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 TRUB2O95900 331 aaKnown RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 F9P00740 461 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 SOD2P04179 222 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 CPB1P15086 417 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 CYP2F1P24903 491 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 FLT3P36888 993 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 TUFMP49411 452 aaKnown RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 DAOAP59103 153 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 TAS2R40P59535 323 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 RPL10AP62906 217 aaKnown RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 HTRA4P83105 476 aaPredicted RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 CREMQ03060 361 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 ADCY1Q08828 1119 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 ZNF252P-AS1Q0IIN9 211 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 ZNF211Q13398 564 aaPredicted RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 SMC1AQ14683 1233 aaKnown RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 SLC25A52Q3SY17 297 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 CCDC14Q49A88 953 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 STRADAQ7RTN6 431 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 MAATS1Q7Z4T9 603 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 DDX53Q86TM3 631 aaKnown RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 SLC13A5Q86YT5 568 aaPredicted RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 MAP7D3Q8IWC1 876 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 SCN4BQ8IWT1 228 aa10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 RNF168Q8IYW5 571 aaPredicted RBP10.99□□□□□ -0.65
CHMP1B-202ENST00000588284 DEFB106AQ8N104 65 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms