RNA–Protein interactions for RNA: ENST00000588161.5

RBM42-203, Transcript of RNA binding motif protein 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM42, Length 1,609 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-203ENST00000588161 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.19■■□□□ 1.3
RBM42-203ENST00000588161 LCHNA4D1U4 455 aa23.18■■□□□ 1.3
RBM42-203ENST00000588161 TNFRSF10BO14763 440 aa23.18■■□□□ 1.3
RBM42-203ENST00000588161 SLU7O95391 586 aaKnown RBP23.18■■□□□ 1.3
RBM42-203ENST00000588161 DESP17661 470 aa23.18■■□□□ 1.3
RBM42-203ENST00000588161 YWHAZP63104 245 aaKnown RBP23.18■■□□□ 1.3
RBM42-203ENST00000588161 CKAP4Q07065 602 aaKnown RBP23.18■■□□□ 1.3
RBM42-203ENST00000588161 LRRC38Q5VT99 294 aa23.18■■□□□ 1.3
RBM42-203ENST00000588161 TRNP1Q6NT89 227 aa23.18■■□□□ 1.3
RBM42-203ENST00000588161 ALG3Q92685 438 aa23.18■■□□□ 1.3
RBM42-203ENST00000588161 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.18■■□□□ 1.32e-7■■□□□ 12.4
RBM42-203ENST00000588161 MRPL17Q9NRX2 175 aaKnown RBP23.18■■□□□ 1.3
RBM42-203ENST00000588161 WDR27A2RRH5 827 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 ADAM12O43184 909 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 RNF8O76064 485 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 VNN2O95498 520 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 RPL17P18621 184 aaKnown RBP23.17■■□□□ 1.3
RBM42-203ENST00000588161 SDC4P31431 198 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 BMPR1AP36894 532 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 RWDD2BP57060 319 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 CREMQ03060 361 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 CCDC14Q49A88 953 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 C9orf50Q5SZB4 431 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 TPGS2Q68CL5 300 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 KLHL23Q8NBE8 558 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 FAM149B1Q96BN6 582 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 CAPZA3Q96KX2 299 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 RNPC3Q96LT9 517 aaKnown RBP23.17■■□□□ 1.3
RBM42-203ENST00000588161 NCAPGQ9BPX3 1015 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 CARD6Q9BX69 1037 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 PLVAPQ9BX97 442 aa23.17■■□□□ 1.3
RBM42-203ENST00000588161 DAB1O75553 588 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 USP17L7P0C7H9 530 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 HAPLN1P10915 354 aaPredicted RBP23.16■■□□□ 1.3
RBM42-203ENST00000588161 PAFAH1B1P43034 410 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 PTPN9P43378 593 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 SLC5A3P53794 718 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 TAS2R40P59535 323 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 NDRG1Q92597 394 aaKnown RBP23.16■■□□□ 1.3
RBM42-203ENST00000588161 DDX23Q9BUQ8 820 aaKnown RBP23.16■■□□□ 1.3
RBM42-203ENST00000588161 ZBP1Q9H171 429 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 POPDC2Q9HBU9 364 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.16■■□□□ 1.3
RBM42-203ENST00000588161 FNIP2Q9P278 1114 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 HSFX1Q9UBD0 423 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 AFF4Q9UHB7 1163 aaKnown RBP23.16■■□□□ 1.3
RBM42-203ENST00000588161 LZTS1Q9Y250 596 aa23.16■■□□□ 1.3
RBM42-203ENST00000588161 PATJQ8NI35 1801 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 LRCH4O75427 683 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 ABLIM3O94929 683 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 CTSAP10619 480 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 PCK1P35558 622 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 MATKP42679 507 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 SSR1P43307 286 aaKnown RBP23.15■■□□□ 1.3
RBM42-203ENST00000588161 MARCKSL1P49006 195 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 DDR2Q16832 855 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 HADHQ16836 314 aaKnown RBP23.15■■□□□ 1.3
RBM42-203ENST00000588161 CCDC181Q5TID7 509 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 DCAF12L1Q5VU92 463 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 DAB2IPQ5VWQ8 1189 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 NUP93Q8N1F7 819 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 RASGEF1CQ8N431 466 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 MNS1Q8NEH6 495 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 ZNF461Q8TAF7 563 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 ACTRT1Q8TDG2 376 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 CFAP57Q96MR6 1250 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 SLC2A13Q96QE2 648 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 LINC01553A4QN01 128 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 YJEFN3A6XGL0 299 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 E7ENQ6 273 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 CEP104O60308 925 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 LILRB3O75022 631 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 CTNNB1P35222 781 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 RPL10AP62906 217 aaKnown RBP23.15■■□□□ 1.3
RBM42-203ENST00000588161 DUSP4Q13115 394 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 RAB33AQ14088 237 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 SHHQ15465 462 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 MGAT5BQ3V5L5 792 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 BHLHA9Q7RTU4 235 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 TTC9BQ8N6N2 239 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 ARFGAP1Q8N6T3 406 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 SPATA17Q96L03 361 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 CEP295NLQ96MC4 621 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 C11orf84Q9BUA3 381 aaPredicted RBP23.15■■□□□ 1.3
RBM42-203ENST00000588161 RXFP1Q9HBX9 757 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 TTC7AQ9ULT0 858 aaPredicted RBP23.15■■□□□ 1.3
RBM42-203ENST00000588161 SLC27A5Q9Y2P5 690 aa23.15■■□□□ 1.3
RBM42-203ENST00000588161 LTFP02788 710 aa23.14■■□□□ 1.29
RBM42-203ENST00000588161 NOS2P35228 1153 aa23.14■■□□□ 1.29
RBM42-203ENST00000588161 TUFMP49411 452 aaKnown RBP23.14■■□□□ 1.29
RBM42-203ENST00000588161 ZNF572Q7Z3I7 529 aaPredicted RBP23.14■■□□□ 1.29
RBM42-203ENST00000588161 POLNQ7Z5Q5 900 aa23.14■■□□□ 1.29
RBM42-203ENST00000588161 KATNAL2Q8IYT4 538 aa23.14■■□□□ 1.29
RBM42-203ENST00000588161 DEFB106AQ8N104 65 aa23.14■■□□□ 1.29
RBM42-203ENST00000588161 SCAMP5Q8TAC9 235 aa23.14■■□□□ 1.29
RBM42-203ENST00000588161 CENPIQ92674 756 aaPredicted RBP23.14■■□□□ 1.29
RBM42-203ENST00000588161 GOLGA1Q92805 767 aa23.14■■□□□ 1.29
RBM42-203ENST00000588161 TRIM62Q9BVG3 475 aa23.14■■□□□ 1.29
RBM42-203ENST00000588161 CRISPLD1Q9H336 500 aa23.14■■□□□ 1.29
RBM42-203ENST00000588161 FBXO44Q9H4M3 255 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms