RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CTAGE9A4FU28 777 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 MYO1FO00160 1098 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 TRIM66O15016 1216 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 CXCL14O95715 111 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 RB1P06400 928 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 CNPP09543 421 aaKnown RBP11.87□□□□□ -0.51
VMP1-207ENST00000588131 USP17L7P0C7H9 530 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 ATF6P18850 670 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 COMTP21964 271 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 FLT3P36888 993 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 SCNN1AP37088 669 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 RGS19P49795 217 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 SLC5A3P53794 718 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 DAOAP59103 153 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 RNASE9P60153 205 aaKnown RBP11.87□□□□□ -0.51
VMP1-207ENST00000588131 ERVK-21P61565 698 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 CAMK1Q14012 370 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 MEI1Q5TIA1 1274 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 DAB2IPQ5VWQ8 1189 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 PLPP4Q5VZY2 271 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 HFE2Q6ZVN8 426 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 SLC26A9Q7LBE3 791 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 TMC7Q7Z402 723 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 PEX26Q7Z412 305 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 KIF18AQ8NI77 898 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 SCAMP5Q8TAC9 235 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 ZNF461Q8TAF7 563 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 GPR152Q8TDT2 470 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 RXFP2Q8WXD0 754 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 SAMD11Q96NU1 681 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 KLHL5Q96PQ7 755 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 TGS1Q96RS0 853 aaKnown RBP11.87□□□□□ -0.51
VMP1-207ENST00000588131 TLR10Q9BXR5 811 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 CERS4Q9HA82 394 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 CNGB3Q9NQW8 809 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 ENTPD7Q9NQZ7 604 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 IP6K2Q9UHH9 426 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 SSX2IPQ9Y2D8 614 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 JRKLQ9Y4A0 524 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 USP3Q9Y6I4 520 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 COL4A4P53420 1690 aaPredicted RBP11.87□□□□□ -0.51
VMP1-207ENST00000588131 PLXNA3P51805 1871 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 MYO16Q9Y6X6 1858 aa11.87□□□□□ -0.51
VMP1-207ENST00000588131 C2CD4BA6NLJ0 364 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 YJEFN3A6XGL0 299 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 HIDE1A8MVS5 230 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 E7ENQ6 273 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 FSCN2O14926 492 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 FBXO21O94952 628 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 ZBED1O96006 694 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 ATF2P15336 505 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 GPD1P21695 349 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 PSMA2P25787 234 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 BMP8BP34820 402 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 IRS1P35568 1242 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 DNA2P51530 1060 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 USP46P62068 366 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 AMPD2Q01433 879 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 CREMQ03060 361 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 UBE3AQ05086 875 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 IFRD2Q12894 506 aaPredicted RBP11.86□□□□□ -0.51
VMP1-207ENST00000588131 TPGS2Q68CL5 300 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 PM20D1Q6GTS8 502 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 NUP93Q8N1F7 819 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 SCML4Q8N228 414 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 C11orf84Q9BUA3 381 aaPredicted RBP11.86□□□□□ -0.51
VMP1-207ENST00000588131 CYP4F11Q9HBI6 524 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 TLR9Q9NR96 1032 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 AMFRQ9UKV5 643 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 USTQ9Y2C2 406 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 ATG2AQ2TAZ0 1938 aa11.86□□□□□ -0.51
VMP1-207ENST00000588131 C2orf71A6NGG8 1288 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 H3BNC9 293 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 DPYSL4O14531 572 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 DDX3YO15523 660 aaKnown RBP11.85□□□□□ -0.51
VMP1-207ENST00000588131 SPOPO43791 374 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 HSF2BPO75031 334 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 DAB1O75553 588 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 FYNP06241 537 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 TCF4P15884 667 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 PDGFRAP16234 1089 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 TFE3P19532 575 aaPredicted RBP11.85□□□□□ -0.51
VMP1-207ENST00000588131 MAN1A1P33908 653 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 MARCKSL1P49006 195 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 PGFP49763 221 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 TAS2R40P59535 323 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 RPL10AP62906 217 aaKnown RBP11.85□□□□□ -0.51
VMP1-207ENST00000588131 GPM6BQ13491 265 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 SMC1AQ14683 1233 aaKnown RBP11.85□□□□□ -0.51
VMP1-207ENST00000588131 RAB30Q15771 203 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 C15orf59Q2T9L4 293 aaPredicted RBP11.85□□□□□ -0.51
VMP1-207ENST00000588131 CCDC14Q49A88 953 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 RAB6CQ53S08 254 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 EFHC1Q5JVL4 640 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 SH3PXD2AQ5TCZ1 1133 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 PAPD7Q5XG87 772 aaKnown RBP11.85□□□□□ -0.51
VMP1-207ENST00000588131 TDHQ8IZJ6 230 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 DEFB106AQ8N104 65 aa11.85□□□□□ -0.51
VMP1-207ENST00000588131 ARFGAP1Q8N6T3 406 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms