RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 RPP40O75818 363 aaKnown RBP11.91□□□□□ -0.5
ACTN4-209ENST00000586538 VNN1O95497 513 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 APBB3O95704 486 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 EGFP01133 1207 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 ASPAP45381 313 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 RAP1GAPP47736 663 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 PSEN1P49768 467 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 MXI1P50539 228 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 NDST1P52848 882 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 CDH8P55286 799 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 YWHAEP62258 255 aaKnown RBP11.91□□□□□ -0.5
ACTN4-209ENST00000586538 DLG4P78352 724 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 INCA1Q0VD86 236 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 COBLL1Q53SF7 1204 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 HEATR6Q6AI08 1181 aaKnown RBP11.91□□□□□ -0.5
ACTN4-209ENST00000586538 CACNA2D4Q7Z3S7 1137 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 FILIP1Q7Z7B0 1213 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 ACOT1Q86TX2 421 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 RPLP0P6Q8NHW5 317 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 PLEKHO2Q8TD55 490 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 GAB3Q8WWW8 586 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 RTKNQ9BST9 563 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 CSNK1G1Q9HCP0 422 aa11.91□□□□□ -0.5
ACTN4-209ENST00000586538 LSM7Q9UK45 103 aaKnown RBP11.91□□□□□ -0.5
ACTN4-209ENST00000586538 OTOL1A6NHN0 477 aaPredicted RBP11.9□□□□□ -0.5
ACTN4-209ENST00000586538 CLDN5O00501 218 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 SLC16A3O15427 465 aaKnown RBP11.9□□□□□ -0.5
ACTN4-209ENST00000586538 ALDH1A2O94788 518 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 APODP05090 189 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 PRR29P0C7W0 189 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 MRPS21P82921 87 aaKnown RBP11.9□□□□□ -0.5
ACTN4-209ENST00000586538 GAD2Q05329 585 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 LRRC63Q05C16 580 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 ELF2Q15723 593 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 ZNF658Q5TYW1 1059 aaPredicted RBP11.9□□□□□ -0.5
ACTN4-209ENST00000586538 TRMT11Q7Z4G4 463 aaKnown RBP11.9□□□□□ -0.5
ACTN4-209ENST00000586538 FUKQ8N0W3 1084 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 DCLK2Q8N568 766 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 FBXL13Q8NEE6 735 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 SLC2A14Q8TDB8 520 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 NETO1Q8TDF5 533 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 SMARCE1Q969G3 411 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 RMDN1Q96DB5 314 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 TIGD1Q96MW7 591 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 KCNK16Q96T55 309 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 HNRNPABQ99729 332 aaKnown RBP11.9□□□□□ -0.5
ACTN4-209ENST00000586538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.9□□□□□ -0.53e-7■■■■■ 41.4
ACTN4-209ENST00000586538 DLL3Q9NYJ7 618 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 IL37Q9NZH6 218 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 CFAP97Q9P2B7 532 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 EBF1Q9UH73 591 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 NME7Q9Y5B8 376 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 PCDHGA5Q9Y5G8 931 aa11.9□□□□□ -0.5
ACTN4-209ENST00000586538 TNFRSF10BO14763 440 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 PSMA7O14818 248 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 AXIN1O15169 862 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 COCHO43405 550 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 RHOBTB1O94844 696 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 ZDHHC11BP0C7U3 371 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 ADH5P11766 374 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 ATP5C1P36542 298 aaKnown RBP11.89□□□□□ -0.51
ACTN4-209ENST00000586538 GCLMP48507 274 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 MAP3K7CLP57077 242 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 FKBP3Q00688 224 aaKnown RBP11.89□□□□□ -0.51
ACTN4-209ENST00000586538 CETN1Q12798 172 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 DMC1Q14565 340 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 DHCR24Q15392 516 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 CSRP2Q16527 193 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 RSPO4Q2I0M5 234 aaPredicted RBP11.89□□□□□ -0.51
ACTN4-209ENST00000586538 ZCWPW2Q504Y3 356 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 KLHDC10Q6PID8 442 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 ADGRG2Q8IZP9 1017 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 ARHGAP18Q8N392 663 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 TSTD1Q8NFU3 115 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 RIN3Q8TB24 985 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 KCNV2Q8TDN2 545 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 DDX1Q92499 740 aaKnown RBP11.89□□□□□ -0.51
ACTN4-209ENST00000586538 CHFRQ96EP1 664 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 CYFIP2Q96F07 1278 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 PNKPQ96T60 521 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 RNF38Q9H0F5 515 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 GOLPH3LQ9H4A5 285 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 MMRN2Q9H8L6 949 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 SMPD4Q9NXE4 827 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 MAPK8IP1Q9UQF2 711 aa11.89□□□□□ -0.51
ACTN4-209ENST00000586538 ZNF292O60281 2723 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 ZBTB24O43167 697 aaPredicted RBP11.88□□□□□ -0.51
ACTN4-209ENST00000586538 HRO43593 1189 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 TLR5O60602 858 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 CILPO75339 1184 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 CYP17A1P05093 508 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 RALAP11233 206 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 CCDC130P13994 396 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 ADORA2BP29275 332 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 GRIA2P42262 883 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 DGKEP52429 567 aa11.88□□□□□ -0.51
ACTN4-209ENST00000586538 MCCD1P59942 119 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms