RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 XPO1O14980 1071 aaKnown RBP21.43■■□□□ 1.02
ATG4D-204ENST00000586417 SASH3O75995 380 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 PBX2P40425 430 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 SNX16P57768 344 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 PLCB3Q01970 1234 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 ACAP1Q15027 740 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 TAF5Q15542 800 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 TAS1R1Q7RTX1 841 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 MAATS1Q7Z4T9 603 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 IFT20Q8IY31 132 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 C12orf50Q8NA57 414 aaPredicted RBP21.43■■□□□ 1.02
ATG4D-204ENST00000586417 CCDC26Q8TAB7 109 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 RXFP2Q8WXD0 754 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 CLP1Q92989 425 aaKnown RBP21.43■■□□□ 1.02
ATG4D-204ENST00000586417 IGSF21Q96ID5 467 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 B3GALT6Q96L58 329 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 VN1R3Q9BXE9 311 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 CDH9Q9ULB4 789 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 MTUS1Q9ULD2 1270 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 ESYT3A0FGR9 886 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 MYBPHLA2RUH7 354 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 TTI1O43156 1089 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 RALAP11233 206 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 LAG3P18627 525 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 GPD1P21695 349 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 IL1R2P27930 398 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 CHRNA3P32297 505 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 BMP8BP34820 402 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 KLF1Q13351 362 aaPredicted RBP21.43■■□□□ 1.02
ATG4D-204ENST00000586417 TTC27Q6P3X3 843 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 SLC39A11Q8N1S5 342 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 AENQ8WTP8 325 aaKnown RBP21.43■■□□□ 1.02
ATG4D-204ENST00000586417 CASKIN2Q8WXE0 1202 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 CNPY3Q9BT09 278 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 KLHL11Q9NVR0 708 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 CDH23Q9H251 3354 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 TRANK1O15050 2925 aa21.43■■□□□ 1.02
ATG4D-204ENST00000586417 LINC01553A4QN01 128 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 DPYSL4O14531 572 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 ATP8B1O43520 1251 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 GRAP2O75791 330 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 BEST1O76090 585 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 KRT1P04264 644 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 NPR3P17342 541 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 SCNN1AP37088 669 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 ACADSBP45954 432 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 TRADDQ15628 312 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 MAP9Q49MG5 647 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 FUT10Q6P4F1 479 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 PIGZQ86VD9 579 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 CCDC50Q8IVM0 306 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 RCOR2Q8IZ40 523 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 CLEC4CQ8WTT0 213 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 MAGOHBQ96A72 148 aaKnown RBP21.42■■□□□ 1.02
ATG4D-204ENST00000586417 RBM41Q96IZ5 413 aaKnown RBP21.42■■□□□ 1.02
ATG4D-204ENST00000586417 SLITRK1Q96PX8 696 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 OSBPL8Q9BZF1 889 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 PCYOX1Q9UHG3 505 aa21.42■■□□□ 1.02
ATG4D-204ENST00000586417 YBX2Q9Y2T7 364 aaKnown RBP21.42■■□□□ 1.02
ATG4D-204ENST00000586417 PI4K2BG5E9Z4 385 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 EFEMP2O95967 443 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 CA3P07451 260 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 PDGFRAP16234 1089 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 PCSK1P29120 753 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 PTGIRP43119 386 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 CARSP49589 748 aaKnown RBP21.41■■□□□ 1.02
ATG4D-204ENST00000586417 MLLT1Q03111 559 aaPredicted RBP21.41■■□□□ 1.02
ATG4D-204ENST00000586417 FAM171A1Q5VUB5 890 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 CLEC20AQ6ZU45 233 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 SLC26A9Q7LBE3 791 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 SEC14L1Q92503 715 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 RAPGEF5Q92565 580 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 RNF25Q96BH1 459 aaPredicted RBP21.41■■□□□ 1.02
ATG4D-204ENST00000586417 PCED1BQ96HM7 432 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 ASNSD1Q9NWL6 643 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 DDX56Q9NY93 547 aaKnown RBP21.41■■□□□ 1.02
ATG4D-204ENST00000586417 PCK1P35558 622 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 DHX34Q14147 1143 aaKnown RBP21.41■■□□□ 1.02
ATG4D-204ENST00000586417 CCDC14Q49A88 953 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 SH3PXD2AQ5TCZ1 1133 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 MFSD7Q6UXD7 560 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 CHRDL2Q6WN34 429 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 FAM35AQ86V20 835 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 MYCBPAPQ8TBZ2 947 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 MAIP1Q8WWC4 291 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 ACSF2Q96CM8 615 aaPredicted RBP21.41■■□□□ 1.02
ATG4D-204ENST00000586417 HEMGNQ9BXL5 484 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 LRRC19Q9H756 370 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 DSEQ9UL01 958 aa21.41■■□□□ 1.02
ATG4D-204ENST00000586417 SF3B1O75533 1304 aaKnown RBP eCLIP21.4■■□□□ 1.023e-6■■■■■ 119.6
ATG4D-204ENST00000586417 PLXNA4Q9HCM2 1894 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 C3orf70A6NLC5 250 aaPredicted RBP21.4■■□□□ 1.02
ATG4D-204ENST00000586417 MAP2K7O14733 419 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 TRAPPC3O43617 180 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 LCP1P13796 627 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 MIPP30301 263 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 PTPN7P35236 360 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 COILP38432 576 aaPredicted RBP21.4■■□□□ 1.02
ATG4D-204ENST00000586417 DR1Q01658 176 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 KCTD19Q17RG1 926 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms