RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 L2HGDHQ9H9P8 463 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 PARVAQ9NVD7 372 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 ABI2Q9NYB9 513 aaPredicted RBP13.32□□□□□ -0.28
VMP1-202ENST00000585847 ZNF638Q14966 1978 aaKnown RBP13.32□□□□□ -0.28
VMP1-202ENST00000585847 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 PI4K2BG5E9Z4 385 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 ZMYND10O75800 440 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 BEST1O76090 585 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 CFHP08603 1231 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 ATF6P18850 670 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 BDNFP23560 247 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 BRD2P25440 801 aaKnown RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 MAN1A1P33908 653 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 SLC1A1P43005 524 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 ACADSBP45954 432 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 BCAT1P54687 386 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 NAP1L1P55209 391 aaKnown RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 CKAP4Q07065 602 aaKnown RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 NFE2Q16621 373 aaPredicted RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 WHAMMP3Q1A5X7 153 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 LEXMQ3ZCV2 418 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 CFAP221Q4G0U5 840 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 PKDCCQ504Y2 493 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 PAPD7Q5XG87 772 aaKnown RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 MON1BQ7L1V2 547 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 TTC30AQ86WT1 665 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 MCOLN2Q8IZK6 566 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 GJD3Q8N144 294 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 C12orf76Q8N812 135 aaPredicted RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 C1orf131Q8NDD1 294 aaKnown RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 SPPL2BQ8TCT7 592 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 SLC2A14Q8TDB8 520 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 C2orf15Q8WU43 125 aaKnown RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 HDAC7Q8WUI4 952 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 KHSRPQ92945 711 aaKnown RBP eCLIP13.31□□□□□ -0.28
VMP1-202ENST00000585847 PPP2R3CQ969Q6 453 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 ZNF653Q96CK0 615 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 PABPC5Q96DU9 382 aaKnown RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 CYFIP2Q96F07 1278 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 MSLNLQ96KJ4 702 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 HEXIM2Q96MH2 286 aaKnown RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 HNRNPABQ99729 332 aaKnown RBP13.31□□□□□ -0.28
VMP1-202ENST00000585847 SMOQ99835 787 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 CYP4F11Q9HBI6 524 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 ABCB6Q9NP58 842 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 ADAM22Q9P0K1 906 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 YIPF1Q9Y548 306 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 PCDHB5Q9Y5E4 795 aa13.31□□□□□ -0.28
VMP1-202ENST00000585847 RCCD1A6NED2 376 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 NRG2O14511 850 aaPredicted RBP13.3□□□□□ -0.28
VMP1-202ENST00000585847 SART1O43290 800 aaKnown RBP13.3□□□□□ -0.28
VMP1-202ENST00000585847 C8AP07357 584 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 ALADP13716 330 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 MAGEA11P43364 429 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 NOP2P46087 812 aaKnown RBP13.3□□□□□ -0.28
VMP1-202ENST00000585847 SDHAF4Q5VUM1 108 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 NAA35Q5VZE5 725 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 PTCRAQ6ISU1 281 aaPredicted RBP13.3□□□□□ -0.28
VMP1-202ENST00000585847 ANKRD54Q6NXT1 300 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 SLFN11Q7Z7L1 901 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 SPATA2LQ8IUW3 424 aaPredicted RBP13.3□□□□□ -0.28
VMP1-202ENST00000585847 C3orf20Q8ND61 904 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 STKLD1Q8NE28 680 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 MNS1Q8NEH6 495 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 TPCN2Q8NHX9 752 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 SLC7A14Q8TBB6 771 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 FNIP1Q8TF40 1166 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 CASP10Q92851 521 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 ZNF707Q96C28 371 aaPredicted RBP13.3□□□□□ -0.28
VMP1-202ENST00000585847 FUBP3Q96I24 572 aaKnown RBP eCLIP13.3□□□□□ -0.28
VMP1-202ENST00000585847 PCDHB18PQ96TA0 734 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 S1PR5Q9H228 398 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 PLEKHA4Q9H4M7 779 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 CSNK1G1Q9HCP0 422 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 CLDND1Q9NY35 253 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 CTTNBP2NLQ9P2B4 639 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 HSFX1Q9UBD0 423 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 CNOT8Q9UFF9 292 aaKnown RBP13.3□□□□□ -0.28
VMP1-202ENST00000585847 CDH22Q9UJ99 828 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 MAFFQ9ULX9 164 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 HYOU1Q9Y4L1 999 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 INSL5Q9Y5Q6 135 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 DENND4CQ5VZ89 1909 aa13.3□□□□□ -0.28
VMP1-202ENST00000585847 OBSL1O75147 1896 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 PRR33A8MZF0 331 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 HHLA1C9JL84 531 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 GABBR2O75899 941 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 ADORA2BP29275 332 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 GABRB2P47870 512 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 BST2Q10589 180 aaKnown RBP13.29□□□□□ -0.28
VMP1-202ENST00000585847 TWF1Q12792 350 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 DDR2Q16832 855 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 PUS10Q3MIT2 529 aaKnown RBP13.29□□□□□ -0.28
VMP1-202ENST00000585847 PLEKHA7Q6IQ23 1121 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 C4orf50Q6ZRC1 276 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 ARCQ7LC44 396 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 ERICH1Q86X53 443 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 SLC35F6Q8N357 371 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 CEP112Q8N8E3 955 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms