RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 GPD2P43304 727 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CDK16Q00536 496 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CMPK2Q5EBM0 449 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 EEF1DP3Q658K8 133 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CYP4V2Q6ZWL3 525 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 EXOC8Q8IYI6 725 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 C1orf127Q8N9H9 656 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ELOVL4Q9GZR5 314 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PEX10O60683 326 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CILPO75339 1184 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FAM155BO75949 473 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 IL18RAPO95256 599 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 C1QAP02745 245 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SERPINB3P29508 390 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PTDSS1P48651 473 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CDH6P55285 790 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 YWHAGP61981 247 aaKnown RBP eCLIP14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 LY6KQ17RY6 165 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 LBX2Q6XYB7 198 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CDR2LQ86X02 465 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TMEM192Q8IY95 271 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TTC17Q96AE7 1141 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TMEM176AQ96HP8 235 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NSL1Q96IY1 281 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ADPGKQ9BRR6 497 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TMEM120AQ9BXJ8 343 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SMYD3Q9H7B4 428 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 RPF1Q9H9Y2 349 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 M0QYV0 167 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 KLF11O14901 512 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 AVILO75366 819 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 BGNP21810 368 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TFDP2Q14188 446 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FAM47CQ5HY64 1035 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FAM102AQ5T9C2 384 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SH3PXD2AQ5TCZ1 1133 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SLC26A11Q86WA9 606 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TRIM50Q86XT4 487 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CFAP61Q8NHU2 1237 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FAF2Q96CS3 445 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CNPY3Q9BT09 278 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CDT1Q9H211 546 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 USP29Q9HBJ7 922 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FBXO6Q9NRD1 293 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 H0Y3Z8 333 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 INO80B-WBP1J3KQ70 363 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 GSC2O15499 205 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 HMGCRP04035 888 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NFICP08651 508 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SERPINB4P48594 390 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 KRT72Q14CN4 511 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 KHDC1Q4VXA5 237 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SH3D19Q5HYK7 790 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SYCP2LQ5T4T6 812 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TTC39BQ5VTQ0 682 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 RFWD3Q6PCD5 774 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PRPF39Q86UA1 669 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TEX9Q8N6V9 391 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 INO80BQ9C086 356 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PAK5Q9P286 719 aa14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CORO1CQ9ULV4 474 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-237ENST00000585163 C2CD4BA6NLJ0 364 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NFKBIEO00221 500 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 LGR5O75473 907 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 GPD1P21695 349 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 RXRBP28702 533 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 HSDL1Q3SXM5 330 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ANGEL2Q5VTE6 544 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TRNP1Q6NT89 227 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 EEPD1Q7L9B9 569 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 RIOX2Q8IUF8 465 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TMEM130Q8N3G9 435 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CXorf38Q8TB03 319 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 RTP4Q96DX8 246 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NLRP4Q96MN2 994 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 RNF157Q96PX1 679 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SRPK1Q96SB4 655 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 GPR20Q99678 358 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FRMD8Q9BZ67 464 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 RAB6BQ9NRW1 208 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TNFSF13BQ9Y275 285 aa14.78□□□□□ -0.04
CDK5RAP3-237ENST00000585163 H7C0C1 242 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 GYG2O15488 501 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ITGB3P05106 788 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 GJB1P08034 283 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NEFHP12036 1026 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ATP6V1C1P21283 382 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ATP5OP48047 213 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 YWHAZP63104 245 aaKnown RBP14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ZBTB16Q05516 673 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NOL9Q5SY16 702 aaKnown RBP14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 DSTYKQ6XUX3 929 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PRR11Q96HE9 360 aaPredicted RBP14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ZNF668Q96K58 619 aaPredicted RBP14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 VRTNQ9H8Y1 702 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 BTBD7Q9P203 1132 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ZNF180Q9UJW8 692 aa14.77□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TTLL3Q9Y4R7 772 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms