RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 AOX1Q06278 1338 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF541Q9H0D2 1346 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 UTRNP46939 3433 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ABHD14A-ACY1A0A1B0GW23 586 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 FAM171A2A8MVW0 826 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 B5MCH6 92 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 HIP1O00291 1037 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 TPP1O14773 563 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PPP1R11O60927 126 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PRPF6O94906 941 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 AGR2O95994 175 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 LDHCP07864 332 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PCP11498 1178 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 COPB2P35606 906 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 CLNS1AP54105 237 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 GUCY1B3Q02153 619 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 MGAT5Q09328 741 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 MAPRE1Q15691 268 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 FSCN1Q16658 493 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 MTHFSDQ2M296 383 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 OVCH1Q7RTY7 1134 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 RPAP2Q8IXW5 612 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 CDYL2Q8N8U2 506 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PROKR1Q8TCW9 393 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 NRG4Q8WWG1 115 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PIGBQ92521 554 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 HPS3Q969F9 1004 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 CGRRF1Q99675 332 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 LRFN3Q9BTN0 628 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 COLEC11Q9BWP8 271 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 SENP6Q9GZR1 1112 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 HELLSQ9NRZ9 838 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 TRMT13Q9NUP7 481 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 CWC25Q9NXE8 425 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC17A6Q9P2U8 582 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PCDHGB2Q9Y5G2 931 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 HCFC2Q9Y5Z7 792 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ECM29Q5VYK3 1845 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ARAP2Q8WZ64 1704 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 COL4A1P02462 1669 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 KRTAP9-7A8MTY7 169 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 GOLGA6L22H0YM25 854 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 OVOL3O00110 214 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 RASSF9O75901 435 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 DDNO94850 711 aaPredicted RBP2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 MMEP08473 750 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 UQCRFS1P1P0C7P4 283 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 MYL4P12829 197 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 ADSLP30566 484 aaPredicted RBP2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 BMPR1AP36894 532 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 PRMT2P55345 433 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 CNN3Q15417 329 aaKnown RBP2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 FAM209BQ5JX69 171 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF280DQ6N043 979 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 TMCO3Q6UWJ1 677 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 DPP9Q86TI2 863 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 TTC7BQ86TV6 843 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF34Q8IZ26 560 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 TRMT2AQ8IZ69 625 aaKnown RBP2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 CNBD1Q8NA66 436 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 KLHDC4Q8TBB5 520 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 IQCDQ96DY2 449 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 TMX3Q96JJ7 454 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 ISCA1Q9BUE6 129 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 SERHLQ9NQF3 203 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 TBCCD1Q9NVR7 557 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 DDX19BQ9UMR2 479 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 POLHQ9Y253 713 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 MED23Q9ULK4 1368 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 A0A0G2JMZ2 1700 aa2.15□□□□□ -2.06
SMCHD1-211ENST00000584897 H3BML4 177 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 APOL1O14791 398 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 SOAT2O75908 522 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ZBTB48P10074 688 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 KITP10721 976 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 AGXTP21549 392 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TNFSF4P23510 183 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CTGFP29279 349 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 IGHMBP2P38935 993 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 IL12RB1P42701 662 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 PHC1P78364 1004 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 MTX1Q13505 466 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TNFAIP1Q13829 316 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 POLD3Q15054 466 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CSRP2Q16527 193 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CRY2Q49AN0 593 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 NPNTQ6UXI9 565 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 BEND5Q7L4P6 421 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CLASRPQ8N2M8 674 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ATG16L2Q8NAA4 619 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 AGBL3Q8NEM8 1001 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 DEPTORQ8TB45 409 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 NUP133Q8WUM0 1156 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 UCMAQ8WVF2 138 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CLEC4DQ8WXI8 215 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 DPF2Q92785 391 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 NUDT16L1Q9BRJ7 211 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TTPALQ9BTX7 342 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 KRTAP4-5Q9BYR2 181 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 PDCL3Q9H2J4 239 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms