RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 COLGALT1Q8NBJ5 622 aa14.66□□□□□ -0.06
UBBP4-202ENST00000584755 IRGQQ8WZA9 623 aa14.66□□□□□ -0.06
UBBP4-202ENST00000584755 TSC1Q92574 1164 aa14.66□□□□□ -0.06
UBBP4-202ENST00000584755 B3GALT6Q96L58 329 aa14.66□□□□□ -0.06
UBBP4-202ENST00000584755 C8orf48Q96LL4 319 aa14.66□□□□□ -0.06
UBBP4-202ENST00000584755 SLC2A13Q96QE2 648 aa14.66□□□□□ -0.06
UBBP4-202ENST00000584755 ULBP1Q9BZM6 244 aa14.66□□□□□ -0.06
UBBP4-202ENST00000584755 DDX56Q9NY93 547 aaKnown RBP14.66□□□□□ -0.06
UBBP4-202ENST00000584755 PCDH10Q9P2E7 1040 aa14.66□□□□□ -0.06
UBBP4-202ENST00000584755 MTRRQ9UBK8 725 aa14.66□□□□□ -0.06
UBBP4-202ENST00000584755 BACE2Q9Y5Z0 518 aa14.66□□□□□ -0.06
UBBP4-202ENST00000584755 CCDC188H7C350 402 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 TNFRSF10BO14763 440 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 FSCN2O14926 492 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 RNF8O76064 485 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 ZRANB2O95218 330 aaKnown RBP eCLIP14.65□□□□□ -0.06
UBBP4-202ENST00000584755 ZBED1O96006 694 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 SOD2P04179 222 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 KRT7P08729 469 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 CYP2F1P24903 491 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 IL1R2P27930 398 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 MIPP30301 263 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 PTPN7P35236 360 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 MATKP42679 507 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 YWHAZP63104 245 aaKnown RBP14.65□□□□□ -0.06
UBBP4-202ENST00000584755 HADHQ16836 314 aaKnown RBP14.65□□□□□ -0.06
UBBP4-202ENST00000584755 LONRF2Q1L5Z9 754 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 TXNRD3NBQ6F5E7 133 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 SLC8B1Q6J4K2 584 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 FAM117BQ6P1L5 589 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 CYP4V2Q6ZWL3 525 aaPredicted RBP14.65□□□□□ -0.06
UBBP4-202ENST00000584755 SLC13A5Q86YT5 568 aaPredicted RBP14.65□□□□□ -0.06
UBBP4-202ENST00000584755 C7orf61Q8IZ16 206 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 C2orf15Q8WU43 125 aaKnown RBP14.65□□□□□ -0.06
UBBP4-202ENST00000584755 HERVK_113Q902F9 699 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 NT5C3BQ969T7 300 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 CFAP57Q96MR6 1250 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 YME1L1Q96TA2 773 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 HERC2P3Q9BVR0 1158 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.65□□□□□ -0.06
UBBP4-202ENST00000584755 PCDHB5Q9Y5E4 795 aa14.65□□□□□ -0.06
UBBP4-202ENST00000584755 KIAA1671Q9BY89 1806 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 ENDOD1O94919 500 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 VNN2O95498 520 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 TRUB2O95900 331 aaKnown RBP14.64□□□□□ -0.07
UBBP4-202ENST00000584755 LINC00271P0C7V0 271 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 CDR1P51861 262 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 RABGGTBP53611 331 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 COPS2P61201 443 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 C15orf59Q2T9L4 293 aaPredicted RBP14.64□□□□□ -0.07
UBBP4-202ENST00000584755 ATP13A4Q4VNC1 1196 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 SH3PXD2AQ5TCZ1 1133 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 BEND5Q7L4P6 421 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 GPR65Q8IYL9 337 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 RCOR2Q8IZ40 523 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 SPPL2BQ8TCT7 592 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 NDRG1Q92597 394 aaKnown RBP14.64□□□□□ -0.07
UBBP4-202ENST00000584755 RBM41Q96IZ5 413 aaKnown RBP14.64□□□□□ -0.07
UBBP4-202ENST00000584755 ANKZF1Q9H8Y5 726 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 ABI2Q9NYB9 513 aaPredicted RBP14.64□□□□□ -0.07
UBBP4-202ENST00000584755 SPG21Q9NZD8 308 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 USP18Q9UMW8 372 aa14.64□□□□□ -0.07
UBBP4-202ENST00000584755 MTMR11A4FU01 709 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 YJEFN3A6XGL0 299 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 E7ENQ6 273 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 KRIT1O00522 736 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 TRIM66O15016 1216 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 FYNP06241 537 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 USP17L7P0C7H9 530 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 NOS2P35228 1153 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 PPM1AP35813 382 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 GRIK1P39086 918 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 SSR1P43307 286 aaKnown RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 HDAC4P56524 1084 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 DSG1Q02413 1049 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 KLF1Q13351 362 aaPredicted RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 SIX1Q15475 284 aaPredicted RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 PPP2R5EQ16537 467 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 TAZQ16635 292 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 SLC25A52Q3SY17 297 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 GLE1Q53GS7 698 aaKnown RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 SPOUT1Q5T280 376 aaKnown RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 PRSS55Q6UWB4 352 aaPredicted RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 STRADAQ7RTN6 431 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 DDX53Q86TM3 631 aaKnown RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 ZDHHC14Q8IZN3 488 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 DEFB106AQ8N104 65 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 FBXO22Q8NEZ5 403 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 CMASQ8NFW8 434 aaPredicted RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 PHOSPHO2Q8TCD6 241 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 FAM172AQ8WUF8 416 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 ANKRD7Q92527 254 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 TMEM169Q96HH4 297 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 SLITRK1Q96PX8 696 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 PEBP4Q96S96 227 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 TBCBQ99426 244 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 NPY6RQ99463 290 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 HTATIP2Q9BUP3 242 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 ADAM33Q9BZ11 813 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms