RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 CLEC20AQ6ZU45 233 aa13.93□□□□□ -0.18
ERBB2-220ENST00000584684 ASCL5Q7RTU5 278 aa13.93□□□□□ -0.18
ERBB2-220ENST00000584684 FILIP1Q7Z7B0 1213 aa13.93□□□□□ -0.18
ERBB2-220ENST00000584684 DDX42Q86XP3 938 aaKnown RBP eCLIP13.93□□□□□ -0.18
ERBB2-220ENST00000584684 SPEM1Q8N4L4 309 aa13.93□□□□□ -0.18
ERBB2-220ENST00000584684 ZBTB44Q8NCP5 570 aa13.93□□□□□ -0.18
ERBB2-220ENST00000584684 SCAMP5Q8TAC9 235 aa13.93□□□□□ -0.18
ERBB2-220ENST00000584684 FBXO32Q969P5 355 aa13.93□□□□□ -0.18
ERBB2-220ENST00000584684 FBXO44Q9H4M3 255 aa13.93□□□□□ -0.18
ERBB2-220ENST00000584684 DUS2Q9NX74 493 aaKnown RBP13.93□□□□□ -0.18
ERBB2-220ENST00000584684 SPTBN4Q9H254 2564 aa13.93□□□□□ -0.18
ERBB2-220ENST00000584684 HHLA1C9JL84 531 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 LEFTY2O00292 366 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 BEST1O76090 585 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 CD58P19256 250 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 IFNAR2P48551 515 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 MARSP56192 900 aaKnown RBP13.92□□□□□ -0.18
ERBB2-220ENST00000584684 ZXDBP98169 803 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 CSTF1Q05048 431 aaKnown RBP13.92□□□□□ -0.18
ERBB2-220ENST00000584684 GAS6Q14393 721 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 PON2Q15165 354 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 TTC8Q8TAM2 541 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 EXOC4Q96A65 974 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 CYFIP2Q96F07 1278 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 ZFRQ96KR1 1074 aaKnown RBP13.92□□□□□ -0.18
ERBB2-220ENST00000584684 ARID3AQ99856 593 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 RNF38Q9H0F5 515 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 ECT2Q9H8V3 914 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.92□□□□□ -0.18
ERBB2-220ENST00000584684 CISHQ9NSE2 258 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 ZSCAN32Q9NX65 697 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 WNT6Q9Y6F9 365 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 R4GN57 208 aa13.92□□□□□ -0.18
ERBB2-220ENST00000584684 SLC9A3R1O14745 358 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-220ENST00000584684 P4HA2O15460 535 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 COCHO43405 550 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 LILRB5O75023 590 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 NFATC1O95644 943 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 ADORA2BP29275 332 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 GJA4P35212 333 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 MAP3K7CLP57077 242 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 GRSF1Q12849 480 aaKnown RBP eCLIP13.91□□□□□ -0.18
ERBB2-220ENST00000584684 PAK1Q13153 545 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 CUL2Q13617 745 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 HECTD3Q5T447 861 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 Q6ZS52 159 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 SLC4A11Q8NBS3 891 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 NELFBQ8WX92 580 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 CYLDQ9NQC7 956 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 RBM12Q9NTZ6 932 aaKnown RBP13.91□□□□□ -0.18
ERBB2-220ENST00000584684 GMIPQ9P107 970 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 SCML2Q9UQR0 700 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 CPQQ9Y646 472 aa13.91□□□□□ -0.18
ERBB2-220ENST00000584684 GNA14O95837 355 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 LMNAP02545 664 aaKnown RBP13.9□□□□□ -0.18
ERBB2-220ENST00000584684 DRD1P21728 446 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 TBXAS1P24557 533 aaPredicted RBP13.9□□□□□ -0.18
ERBB2-220ENST00000584684 HOXA6P31267 233 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 ANP32AP39687 249 aaKnown RBP13.9□□□□□ -0.18
ERBB2-220ENST00000584684 CXCL12P48061 93 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 FMO5P49326 533 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 RAD23BP54727 409 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 NRLP54845 237 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 YWHAEP62258 255 aaKnown RBP13.9□□□□□ -0.18
ERBB2-220ENST00000584684 IFRD2Q12894 506 aaPredicted RBP13.9□□□□□ -0.18
ERBB2-220ENST00000584684 NR1H3Q13133 447 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 ARHGAP17Q68EM7 881 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 ISM2Q6H9L7 571 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 KLHL10Q6JEL2 608 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 FSTL4Q6MZW2 842 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 GPRIN1Q7Z2K8 1008 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 UBR7Q8N806 425 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 OTUB2Q96DC9 234 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 DUSP16Q9BY84 665 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 EPC1Q9H2F5 836 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 TLR8Q9NR97 1041 aaKnown RBP13.9□□□□□ -0.18
ERBB2-220ENST00000584684 KIAA1468Q9P260 1216 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 CTNND2Q9UQB3 1225 aa13.9□□□□□ -0.18
ERBB2-220ENST00000584684 E2F8A0AVK6 867 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 BIN1O00499 593 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 ABL1P00519 1130 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 MBL2P11226 248 aaPredicted RBP13.89□□□□□ -0.19
ERBB2-220ENST00000584684 SATB1Q01826 763 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 CCDC40Q4G0X9 1142 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 FBXO43Q4G163 708 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 PPP1R26Q5T8A7 1209 aaPredicted RBP13.89□□□□□ -0.19
ERBB2-220ENST00000584684 KLHDC10Q6PID8 442 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 CLEC17AQ6ZS10 378 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 TRIM59Q8IWR1 403 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 ZNF276Q8N554 614 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 SUMF1Q8NBK3 374 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 ATRIPQ8WXE1 791 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 TATDN2Q93075 761 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 TMEM176AQ96HP8 235 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 P2RY13Q9BPV8 354 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 UBXN6Q9BZV1 441 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 CCSER2Q9H7U1 834 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 SMPD4Q9NXE4 827 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 CFAP97Q9P2B7 532 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms