RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 EP400NLQ6ZTU2 488 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 UNC5BQ8IZJ1 945 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 NAT14Q8WUY8 206 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 SLC13A1Q9BZW2 595 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 KATNBL1Q9H079 304 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 PTPRHQ9HD43 1115 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 TRIOBPQ9H2D6 2365 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 URB1O60287 2271 aaKnown RBP10.75□□□□□ -0.69
RFFL-212ENST00000584655 IGKV6-21A0A0C4DH24 114 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 TARSL2A2RTX5 802 aaKnown RBP10.75□□□□□ -0.69
RFFL-212ENST00000584655 ATP9BO43861 1147 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 FAM155BO75949 473 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 ZBED1O96006 694 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 F2P00734 622 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 IRF1P10914 325 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 RBL1P28749 1068 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 ZNF844Q08AG5 666 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 DENND5BQ6ZUT9 1274 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 GPRIN1Q7Z2K8 1008 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 XYLT1Q86Y38 959 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 OTUD6BQ8N6M0 293 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 TBCBQ99426 244 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.75□□□□□ -0.69
RFFL-212ENST00000584655 GNEQ9Y223 722 aaKnown RBP10.75□□□□□ -0.69
RFFL-212ENST00000584655 EXOC1LA0A1B0GW35 172 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 RRN3P2A6NIE6 340 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 CCDC188H7C350 402 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 DFFAO00273 331 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 BUD23O43709 281 aaKnown RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 B4GALT4O60513 344 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 TSPAN3O60637 253 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 GPD1P21695 349 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 BMPR2Q13873 1038 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 MGAT5BQ3V5L5 792 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 TMC3Q7Z5M5 1100 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 ARFGAP1Q8N6T3 406 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 SHCBP1Q8NEM2 672 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 DBF4BQ8NFT6 615 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 PPP1R36Q96LQ0 422 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 DCLK3Q9C098 648 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 SCN1AP35498 2009 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 PODXLO00592 558 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 MCF2LO15068 1137 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 TJP3O95049 919 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 IL18RAPO95256 599 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 ACRP10323 421 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 RFX1P22670 979 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 CYP2C18P33260 490 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 ETFBP38117 255 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 CTCFP49711 727 aaPredicted RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 TIGD5Q53EQ6 642 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 EMID1Q96A84 441 aaPredicted RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 MTG1Q9BT17 334 aaPredicted RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 ADAMTS10Q9H324 1103 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 NEU2Q9Y3R4 380 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 NRP1O14786 923 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 TADA2AO75478 443 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 INHAP05111 366 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 CHRNA3P32297 505 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 GPD2P43304 727 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 SREBF2Q12772 1141 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 TAF12Q16514 161 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 PCSK7Q16549 785 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 SLC39A12Q504Y0 691 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 CDCA2Q69YH5 1023 aaPredicted RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 PPM1NQ8N819 430 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 UBQLN1Q9UMX0 589 aaKnown RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 RRP15Q9Y3B9 282 aaKnown RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 GREB1LQ9C091 1923 aaPredicted RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 YJEFN3A6XGL0 299 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 E7ENQ6 273 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 CYP1A1P04798 512 aaPredicted RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 GNAT1P11488 350 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 MRPS6P82932 125 aaKnown RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 MTMR3Q13615 1198 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 KIAA1841Q6NSI8 718 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 B3GALNT2Q8NCR0 500 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 SMG8Q8ND04 991 aaKnown RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 SLITRK1Q96PX8 696 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 SNRNP25Q9BV90 132 aaKnown RBP10.74□□□□□ -0.69
RFFL-212ENST00000584655 SMYD2Q9NRG4 433 aa10.74□□□□□ -0.69
RFFL-212ENST00000584655 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.74□□□□□ -0.69
RFFL-212ENST00000584655 NUP205Q92621 2012 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 PAPPA2Q9BXP8 1791 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 NCANO14594 1321 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 ZC3H4Q9UPT8 1303 aaKnown RBP10.73□□□□□ -0.69
RFFL-212ENST00000584655 PTGESO14684 152 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 CA12O43570 354 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 SURF1Q15526 300 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 APBB1IPQ7Z5R6 666 aaPredicted RBP10.73□□□□□ -0.69
RFFL-212ENST00000584655 SLFN11Q7Z7L1 901 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 CIR1Q86X95 450 aaPredicted RBP10.73□□□□□ -0.69
RFFL-212ENST00000584655 PRMT1Q99873 361 aaKnown RBP10.73□□□□□ -0.69
RFFL-212ENST00000584655 TMEM30AQ9NV96 361 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 MORF4L1Q9UBU8 362 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 LRFN2Q9ULH4 789 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 G3BP2Q9UN86 482 aaKnown RBP10.73□□□□□ -0.69
RFFL-212ENST00000584655 GTF2A1P52655 376 aaPredicted RBP10.73□□□□□ -0.69
RFFL-212ENST00000584655 FAM171A1Q5VUB5 890 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms