RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 EXOC4Q96A65 974 aa14.43□□□□□ -0.1
CDK5RAP3-233ENST00000584186 TIGD1Q96MW7 591 aa14.43□□□□□ -0.1
CDK5RAP3-233ENST00000584186 SMG5Q9UPR3 1016 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-233ENST00000584186 ZNF292O60281 2723 aa14.43□□□□□ -0.1
CDK5RAP3-233ENST00000584186 TRIM49BA6NDI0 452 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 COCHO43405 550 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 RNF40O75150 1001 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 OLFM2O95897 454 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 TCF3P15923 654 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 DRD1P21728 446 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 HOXC13P31276 330 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 FKBP3Q00688 224 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 INCA1Q0VD86 236 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 PKN3Q6P5Z2 889 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 PRR23BQ6ZRT6 265 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 FBXL13Q8NEE6 735 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 ZMIZ2Q8NF64 920 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 OVCA2Q8WZ82 227 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CD101Q93033 1021 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CYFIP2Q96F07 1278 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 DNAI2Q9GZS0 605 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 EPC1Q9H2F5 836 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CCSER2Q9H7U1 834 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 RAB20Q9NX57 234 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 RAB23Q9ULC3 237 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 FAM186AA6NE01 2351 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 FANCMQ8IYD8 2048 aa14.42□□□□□ -0.1
CDK5RAP3-233ENST00000584186 K7ESF4 209 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 PSMA7O14818 248 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 SLC16A3O15427 465 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 ATG13O75143 517 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CILPO75339 1184 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 PXNP49023 591 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 SRSF5Q13243 272 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 STIM1Q13586 685 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 COBLL1Q53SF7 1204 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CLEC20AQ6ZU45 233 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 GPRIN1Q7Z2K8 1008 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 LONP2Q86WA8 852 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 DDX42Q86XP3 938 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 SPATA20Q8TB22 786 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 SECISBP2LQ93073 1101 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 HEXIM2Q96MH2 286 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 HNRNPABQ99729 332 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 FBXO44Q9H4M3 255 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CSNK1G1Q9HCP0 422 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 POLR3BQ9NW08 1133 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 COMMD8Q9NX08 183 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 MAN1B1Q9UKM7 699 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 SLC8A2Q9UPR5 921 aa14.41□□□□□ -0.1
CDK5RAP3-233ENST00000584186 SLC9A3R1O14745 358 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CYP26A1O43174 497 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 GADD45BO75293 160 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 PAPSS2O95340 614 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 IRF1P10914 325 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 ACO1P21399 889 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 PGFP49763 221 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 LRRC63Q05C16 580 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 SIM2Q14190 667 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CBWD6Q4V339 395 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CBWD3Q5JTY5 395 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CBWD5Q5RIA9 395 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 KLHL10Q6JEL2 608 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 RPLP0P6Q8NHW5 317 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 WHAMMQ8TF30 809 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 TATDN2Q93075 761 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 ARID3AQ99856 593 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 GTPBP4Q9BZE4 634 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 TLR8Q9NR97 1041 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 CISHQ9NSE2 258 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 IL37Q9NZH6 218 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 ARMCX3Q9UH62 379 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 SH3BP1Q9Y3L3 701 aa14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 EP300Q09472 2414 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-233ENST00000584186 HELZP42694 1942 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 BIN1O00499 593 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 HRO43593 1189 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 TLR5O60602 858 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 CYP17A1P05093 508 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 TUBP50607 506 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 SEC13P55735 322 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 DHCR24Q15392 516 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 FBXO43Q4G163 708 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 PPP1R26Q5T8A7 1209 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 SNX30Q5VWJ9 437 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 ADGRG2Q8IZP9 1017 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 EZH1Q92800 747 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 DHTKD1Q96HY7 919 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 GMEB2Q9UKD1 530 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 GVINP1Q7Z2Y8 2422 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 DCHS1Q96JQ0 3298 aa14.39□□□□□ -0.11
CDK5RAP3-233ENST00000584186 E2F8A0AVK6 867 aa14.38□□□□□ -0.11
CDK5RAP3-233ENST00000584186 FAM92AA1XBS5 289 aa14.38□□□□□ -0.11
CDK5RAP3-233ENST00000584186 TBX18O95935 607 aa14.38□□□□□ -0.11
CDK5RAP3-233ENST00000584186 ADH1CP00326 375 aa14.38□□□□□ -0.11
CDK5RAP3-233ENST00000584186 ZDHHC11BP0C7U3 371 aa14.38□□□□□ -0.11
CDK5RAP3-233ENST00000584186 CD44P16070 742 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-233ENST00000584186 MCCD1P59942 119 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-233ENST00000584186 LRMPQ12912 555 aa14.38□□□□□ -0.11
CDK5RAP3-233ENST00000584186 CCDC40Q4G0X9 1142 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms