RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 PIK3R2O00459 728 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TGM5O43548 720 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 BUB1O43683 1085 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 HSF2BPO75031 334 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 RTN3O95197 1032 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SEC24AO95486 1093 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ELF1P32519 619 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 NOP2P46087 812 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 DAOAP59103 153 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 MRPS5P82675 430 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 C11orf63Q6NUN7 778 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 LILRA6Q6PI73 481 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 DENND5BQ6ZUT9 1274 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 RTL10Q7L3V2 364 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TRIM58Q8NG06 486 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TPCN2Q8NHX9 752 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 FEZF2Q8TBJ5 459 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 MICAL1Q8TDZ2 1067 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 MCEEQ96PE7 176 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 FBXO44Q9H4M3 255 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 CERS4Q9HA82 394 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 IL37Q9NZH6 218 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 EHD2Q9NZN4 543 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ANAPC7Q9UJX3 599 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SLC27A5Q9Y2P5 690 aa17.57■□□□□ 0.4
CDK5RAP3-230ENST00000584042 FAM92AA1XBS5 289 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 EPOPA6NHQ4 379 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 KIF2AO00139 706 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PRRG1O14668 218 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 DAB1O75553 588 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 MOCS3O95396 460 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ZBED1O96006 694 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 KRT3P12035 628 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 KLRC2P26717 231 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 CLCN4P51793 760 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 NAP1L1P55209 391 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 DDR2Q16832 855 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 EFHC1Q5JVL4 640 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PM20D1Q6GTS8 502 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 DCUN1D2Q6PH85 259 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 CCDC149Q6ZUS6 474 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 CLEC4CQ8WTT0 213 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TRIM62Q9BVG3 475 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TTLL2Q9BWV7 592 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 CHORDC1Q9UHD1 332 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TMEM59LQ9UK28 342 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PAXBP1Q9Y5B6 917 aa17.56■□□□□ 0.4
CDK5RAP3-230ENST00000584042 GRID2IPA4D2P6 1211 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TMEM191CA6NGB0 347 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 DPYSL4O14531 572 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SOAT2O75908 522 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 CSPG5O95196 566 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TUBB4AP04350 444 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 MAN1A1P33908 653 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ALDH1A3P47895 512 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 VEPH1Q14D04 833 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PTPROQ16827 1216 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SDHAF4Q5VUM1 108 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 BHLHA9Q7RTU4 235 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PHLDB2Q86SQ0 1253 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SCUBE3Q8IX30 993 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SYCE1Q8N0S2 351 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 LRRC57Q8N9N7 239 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SCML2Q9UQR0 700 aa17.55■□□□□ 0.4
CDK5RAP3-230ENST00000584042 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 C2CD4BA6NLJ0 364 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SLC38A8A6NNN8 435 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 BUB1BO60566 1050 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 CLASP2O75122 1294 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 GJB6O95452 261 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 USP17L7P0C7H9 530 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 CSH1P0DML2 217 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 CSH2P0DML3 217 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 RPL7AP62424 266 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 BEND5Q7L4P6 421 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 NIPA2Q8N8Q9 360 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 KREMEN2Q8NCW0 462 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 JOSD2Q8TAC2 188 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SCAMP5Q8TAC9 235 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SLC7A14Q8TBB6 771 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 HDAC7Q8WUI4 952 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 MRPL38Q96DV4 380 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 C16orf45Q96MC5 204 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SLC2A13Q96QE2 648 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PLEKHA4Q9H4M7 779 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 IP6K2Q9UHH9 426 aa17.54■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TRANK1O15050 2925 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 MYO1FO00160 1098 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 PROSCO94903 275 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 LTFP02788 710 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 C8AP07357 584 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 GPD1P21695 349 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 FLT3P36888 993 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ETF1P62495 437 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ZNF252P-AS1Q0IIN9 211 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 TWF1Q12792 350 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ELMSAN1Q6PJG2 1045 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SLFN11Q7Z7L1 901 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 ARHGAP18Q8N392 663 aa17.53■□□□□ 0.4
CDK5RAP3-230ENST00000584042 SLC22A17Q8WUG5 538 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms