RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 GNL1P36915 607 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 GRIA2P42262 883 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 TNFRSF4P43489 277 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 IFRD2Q12894 506 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 LY6G5CQ5SRR4 150 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 PEAR1Q5VY43 1037 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 TDRD10Q5VZ19 366 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 LYSMD4Q5XG99 296 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 TRAPPC11Q7Z392 1133 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 PIP4P1Q86T03 277 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 HPS3Q969F9 1004 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 ZNF518BQ9C0D4 1074 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 DPEP3Q9H4B8 488 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 PILRBQ9UKJ0 227 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 PCDH15Q96QU1 1955 aa15.74■□□□□ 0.11
CDK5RAP3-226ENST00000583182 SPAARA0A1B0GVQ0 90 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 VPS37CA5D8V6 355 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 CLDN5O00501 218 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 TACC1O75410 805 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 PTPN1P18031 435 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 HOXD13P35453 343 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 TXLNAP40222 546 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 STAT6P42226 847 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 SEMA3BQ13214 749 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 SURF1Q15526 300 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 SPDYCQ5MJ68 293 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 FAM173BQ6P4H8 233 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 CCDC73Q6ZRK6 1079 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 WDR49Q8IV35 697 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 ETFBKMTQ8IXQ9 262 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 PGBD3Q8N328 593 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 OR6B3Q8NGW1 331 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 ZCCHC14Q8WYQ9 949 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 ZFRQ96KR1 1074 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 SLITRK1Q96PX8 696 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 SNX25Q9H3E2 840 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 SLC32A1Q9H598 525 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 HSPBP1Q9NZL4 362 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 TBC1D14Q9P2M4 693 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 KLK13Q9UKR3 277 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 HCN2Q9UL51 889 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 NEUROG3Q9Y4Z2 214 aa15.73■□□□□ 0.11
CDK5RAP3-226ENST00000583182 E2F8A0AVK6 867 aa15.72■□□□□ 0.11
CDK5RAP3-226ENST00000583182 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-226ENST00000583182 COCHO43405 550 aa15.72■□□□□ 0.11
CDK5RAP3-226ENST00000583182 CFIP05156 583 aa15.72■□□□□ 0.11
CDK5RAP3-226ENST00000583182 CEBPZQ03701 1054 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-226ENST00000583182 DDX42Q86XP3 938 aaKnown RBP eCLIP15.72■□□□□ 0.11
CDK5RAP3-226ENST00000583182 DEFB119Q8N690 84 aa15.72■□□□□ 0.11
CDK5RAP3-226ENST00000583182 NAT16Q8N8M0 369 aa15.72■□□□□ 0.11
CDK5RAP3-226ENST00000583182 B3GNT5Q9BYG0 378 aa15.72■□□□□ 0.11
CDK5RAP3-226ENST00000583182 ELOVL4Q9GZR5 314 aa15.72■□□□□ 0.11
CDK5RAP3-226ENST00000583182 DSPP15924 2871 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 TBC1D3BA6NDS4 549 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 UPK3BL1B0FP48 263 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 UPK3BL2E5RIL1 263 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 TULP3O75386 442 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 DLATP10515 647 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 GABRG2P18507 467 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 YWHAQP27348 245 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 DPP6P42658 865 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 FAM193AP78312 1265 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 SIM1P81133 766 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 GAD2Q05329 585 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 BYSLQ13895 437 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 CCDC65Q8IXS2 484 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 NUP93Q8N1F7 819 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 ZNF513Q8N8E2 541 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 RDH13Q8NBN7 331 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 FBXO32Q969P5 355 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 WBP2Q969T9 261 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 GTPBP2Q9BX10 602 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 CAPN10Q9HC96 672 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 CHORDC1Q9UHD1 332 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 SLC6A14Q9UN76 642 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 MSRB2Q9Y3D2 182 aa15.71■□□□□ 0.11
CDK5RAP3-226ENST00000583182 FREM2Q5SZK8 3169 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 TRIM24O15164 1050 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 HOXC11O43248 304 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 AP5Z1O43299 807 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 FAM163BP0C2L3 166 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 TNNI1P19237 187 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 HOXD12P35452 270 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 RPL6Q02878 288 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 SNRNP35Q16560 246 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 DUOXA1Q1HG43 343 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 WDR72Q3MJ13 1102 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 MIB1Q86YT6 1006 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 BBS7Q8IWZ6 715 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 PDILTQ8N807 584 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 B3GALNT2Q8NCR0 500 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 PDZD8Q8NEN9 1154 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 OR2I1PQ8NGU4 316 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 SCAMP5Q8TAC9 235 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 OTUB2Q96DC9 234 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 KCNK16Q96T55 309 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 CCSER2Q9H7U1 834 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 KIAA1586Q9HCI6 787 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 CALCOCO1Q9P1Z2 691 aa15.7■□□□□ 0.1
CDK5RAP3-226ENST00000583182 A0A1W2PQF6 199 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms