RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ADAMTS18Q8TE60 1221 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 MMS19Q96T76 1030 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 PRSS22Q9GZN4 317 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 FAM204AQ9H8W3 233 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 LPAR3Q9UBY5 353 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 EID1Q9Y6B2 187 aa4.95□□□□□ -1.62
COPS3-217ENST00000583160 A6NNZ2 444 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 CCP110O43303 1012 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 FRS3O43559 492 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 MOSPD3O75425 235 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 USP1O94782 785 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 KLRC1P26715 233 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 MMP13P45452 471 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 CACNB3P54284 484 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 RNF220Q5VTB9 566 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 PTCHD4Q6ZW05 846 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 Q8N9P0 234 aaPredicted RBP4.94□□□□□ -1.62
COPS3-217ENST00000583160 ZBTB45Q96K62 511 aaPredicted RBP4.94□□□□□ -1.62
COPS3-217ENST00000583160 CCDC17Q96LX7 622 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 FYTTD1Q96QD9 318 aaKnown RBP4.94□□□□□ -1.62
COPS3-217ENST00000583160 VN1R3Q9BXE9 311 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 ASIC5Q9NY37 505 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 KLHL13Q9P2N7 655 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 DDX20Q9UHI6 824 aaKnown RBP4.94□□□□□ -1.62
COPS3-217ENST00000583160 ZNF521Q96K83 1311 aa4.94□□□□□ -1.62
COPS3-217ENST00000583160 CD3EAPO15446 510 aaKnown RBP4.93□□□□□ -1.62
COPS3-217ENST00000583160 RRP9O43818 475 aaKnown RBP4.93□□□□□ -1.62
COPS3-217ENST00000583160 GCATO75600 419 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 TOP3BO95985 862 aaKnown RBP4.93□□□□□ -1.62
COPS3-217ENST00000583160 PTDSS1P48651 473 aaKnown RBP4.93□□□□□ -1.62
COPS3-217ENST00000583160 MTHFSP49914 203 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 ITGA8P53708 1063 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 TIRAPP58753 221 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 FMO1Q01740 532 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 LMAN2Q12907 356 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 ARHGEF7Q14155 803 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 NPY5RQ15761 445 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 ZNF750Q32MQ0 723 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 ZNF366Q8N895 744 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 CTHRC1Q96CG8 243 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 FCRL4Q96PJ5 515 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 AFF4Q9UHB7 1163 aaKnown RBP4.93□□□□□ -1.62
COPS3-217ENST00000583160 HDAC9Q9UKV0 1011 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 SHROOM4Q9ULL8 1493 aa4.93□□□□□ -1.62
COPS3-217ENST00000583160 LOC105371045A0A1W2PR82 267 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 BTBD19C9JJ37 291 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 TMEM232C9JQI7 657 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 M0R3H8 397 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 PPEF2O14830 753 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 BCAR3O75815 825 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 MT-CO3P00414 261 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 CREB1P16220 341 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 IL1R2P27930 398 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 DIO1P49895 249 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 COPB1P53618 953 aaKnown RBP4.92□□□□□ -1.62
COPS3-217ENST00000583160 RPS16P62249 146 aaKnown RBP4.92□□□□□ -1.62
COPS3-217ENST00000583160 SLC29A2Q14542 456 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 TRIP6Q15654 476 aaKnown RBP4.92□□□□□ -1.62
COPS3-217ENST00000583160 ZNF813Q6ZN06 617 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 CCDC149Q6ZUS6 474 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 FAM156AQ8NDB6 213 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 JDP2Q8WYK2 163 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 LRTOMTQ8WZ04 291 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 FAM118BQ9BPY3 351 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 EFHD1Q9BUP0 239 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 LRRC27Q9C0I9 530 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 SPRTNQ9H040 489 aaPredicted RBP4.92□□□□□ -1.62
COPS3-217ENST00000583160 VPS16Q9H269 839 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 TUBA8Q9NY65 449 aaPredicted RBP4.92□□□□□ -1.62
COPS3-217ENST00000583160 COL20A1Q9P218 1284 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 MGAT4CQ9UBM8 478 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 TCEAL9Q9UHQ7 104 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 OGDHLQ9ULD0 1010 aa4.92□□□□□ -1.62
COPS3-217ENST00000583160 SCAF8Q9UPN6 1271 aaKnown RBP4.92□□□□□ -1.62
COPS3-217ENST00000583160 RAB27BO00194 218 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 FCHO1O14526 889 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 SPRY2O43597 315 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 PIAS2O75928 621 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 MAP4K4O95819 1239 aaPredicted RBP4.91□□□□□ -1.62
COPS3-217ENST00000583160 MYF5P13349 255 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 HGFP14210 728 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 PHKG2P15735 406 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 GATMP50440 423 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 PGDP52209 483 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 TIAL1Q01085 375 aaKnown RBP eCLIP4.91□□□□□ -1.62
COPS3-217ENST00000583160 POLD3Q15054 466 aaPredicted RBP4.91□□□□□ -1.62
COPS3-217ENST00000583160 KIAA0753Q2KHM9 967 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 C4orf46Q504U0 113 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 DENND2CQ68D51 928 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 DARS2Q6PI48 645 aaKnown RBP4.91□□□□□ -1.62
COPS3-217ENST00000583160 PRSS3P2Q8NHM4 247 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 APIPQ96GX9 242 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 ZNF48Q96MX3 618 aaPredicted RBP4.91□□□□□ -1.62
COPS3-217ENST00000583160 CHST8Q9H2A9 424 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 DHX36Q9H2U1 1008 aaKnown RBP4.91□□□□□ -1.62
COPS3-217ENST00000583160 ZNF287Q9HBT7 754 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 ELOVL5Q9NYP7 299 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 MID2Q9UJV3 735 aa4.91□□□□□ -1.62
COPS3-217ENST00000583160 G3BP2Q9UN86 482 aaKnown RBP4.91□□□□□ -1.62
COPS3-217ENST00000583160 EXOC5O00471 708 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms