RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ARCQ7LC44 396 aa23.7■■□□□ 1.39
CCDC47-204ENST00000582252 SLC35B2Q8TB61 432 aa23.7■■□□□ 1.39
CCDC47-204ENST00000582252 TEKT4Q8WW24 435 aa23.7■■□□□ 1.39
CCDC47-204ENST00000582252 TBCBQ99426 244 aa23.7■■□□□ 1.39
CCDC47-204ENST00000582252 ROPN1BQ9BZX4 212 aaPredicted RBP23.7■■□□□ 1.39
CCDC47-204ENST00000582252 ROPN1Q9HAT0 212 aaPredicted RBP23.7■■□□□ 1.39
CCDC47-204ENST00000582252 PCDH9Q9HC56 1237 aa23.7■■□□□ 1.39
CCDC47-204ENST00000582252 RNF19AQ9NV58 838 aa23.7■■□□□ 1.39
CCDC47-204ENST00000582252 GIT1Q9Y2X7 761 aa23.7■■□□□ 1.39
CCDC47-204ENST00000582252 FGFR1P11362 822 aa23.7■■□□□ 1.38
CCDC47-204ENST00000582252 CKBP12277 381 aa23.7■■□□□ 1.38
CCDC47-204ENST00000582252 ADORA2BP29275 332 aa23.7■■□□□ 1.38
CCDC47-204ENST00000582252 RAB27AP51159 221 aa23.7■■□□□ 1.38
CCDC47-204ENST00000582252 GNGT1P63211 74 aa23.7■■□□□ 1.38
CCDC47-204ENST00000582252 TFDP2Q14188 446 aa23.7■■□□□ 1.38
CCDC47-204ENST00000582252 PDK2Q15119 407 aa23.7■■□□□ 1.38
CCDC47-204ENST00000582252 ZNF618Q5T7W0 954 aa23.7■■□□□ 1.38
CCDC47-204ENST00000582252 CDC42EP4Q9H3Q1 356 aaKnown RBP23.7■■□□□ 1.38
CCDC47-204ENST00000582252 CWC15Q9P013 229 aaKnown RBP23.7■■□□□ 1.38
CCDC47-204ENST00000582252 APOC4-APOC2K7ER74 178 aa23.69■■□□□ 1.38
CCDC47-204ENST00000582252 DNALI1O14645 258 aaPredicted RBP23.69■■□□□ 1.38
CCDC47-204ENST00000582252 APOC2P02655 101 aa23.69■■□□□ 1.38
CCDC47-204ENST00000582252 THP07101 528 aa23.69■■□□□ 1.38
CCDC47-204ENST00000582252 CCDC130P13994 396 aa23.69■■□□□ 1.38
CCDC47-204ENST00000582252 RPL34P49207 117 aaKnown RBP23.69■■□□□ 1.38
CCDC47-204ENST00000582252 ARSEP51690 589 aa23.69■■□□□ 1.38
CCDC47-204ENST00000582252 OTUD4Q01804 1114 aaKnown RBP23.69■■□□□ 1.38
CCDC47-204ENST00000582252 P3H1Q32P28 736 aa23.69■■□□□ 1.38
CCDC47-204ENST00000582252 HIBCHQ6NVY1 386 aaPredicted RBP23.69■■□□□ 1.38
CCDC47-204ENST00000582252 PCGF5Q86SE9 256 aa23.69■■□□□ 1.38
CCDC47-204ENST00000582252 VSIG1Q86XK7 387 aa23.69■■□□□ 1.38
CCDC47-204ENST00000582252 B3GALNT2Q8NCR0 500 aa23.69■■□□□ 1.38
CCDC47-204ENST00000582252 PGM2Q96G03 612 aa23.69■■□□□ 1.38
CCDC47-204ENST00000582252 SGK1O00141 431 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 TULP2O00295 520 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 CYB561D2O14569 222 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 TP73O15350 636 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 PAPSS1O43252 624 aaPredicted RBP23.68■■□□□ 1.38
CCDC47-204ENST00000582252 CDH6P55285 790 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 BFSP2Q13515 415 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 KRT81Q14533 505 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 CCDC14Q49A88 953 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 SLC39A5Q6ZMH5 540 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 SLC26A9Q7LBE3 791 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 RELL1Q8IUW5 271 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 HAUS1Q96CS2 278 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 CALN1Q9BXU9 219 aa23.68■■□□□ 1.38
CCDC47-204ENST00000582252 TSPYL2Q9H2G4 693 aaPredicted RBP23.68■■□□□ 1.38
CCDC47-204ENST00000582252 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.68■■□□□ 1.38
CCDC47-204ENST00000582252 NOVA2Q9UNW9 492 aaKnown RBP23.68■■□□□ 1.38
CCDC47-204ENST00000582252 XPO1O14980 1071 aaKnown RBP23.67■■□□□ 1.38
CCDC47-204ENST00000582252 MCF2LO15068 1137 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 ENDOD1O94919 500 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 COL6A1P12109 1028 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 LMO2P25791 158 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 PTPN9P43378 593 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 ATP1A2P50993 1020 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 IRAK1P51617 712 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 DYNLT1P63172 113 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 ZSCAN26Q16670 478 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 CDO1Q16878 200 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 C15orf59Q2T9L4 293 aaPredicted RBP23.67■■□□□ 1.38
CCDC47-204ENST00000582252 C1orf53Q5VUE5 145 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 TMEM86AQ8N2M4 240 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 ZCCHC9Q8N567 271 aaKnown RBP23.67■■□□□ 1.38
CCDC47-204ENST00000582252 ACTL9Q8TC94 416 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 TMEM106CQ9BVX2 250 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 AAASQ9NRG9 546 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 TPX2Q9ULW0 747 aaKnown RBP23.67■■□□□ 1.38
CCDC47-204ENST00000582252 TANC1Q9C0D5 1861 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 EIF3HO15372 352 aaKnown RBP eCLIP23.67■■□□□ 1.38
CCDC47-204ENST00000582252 RGS16O15492 202 aaPredicted RBP23.67■■□□□ 1.38
CCDC47-204ENST00000582252 GRAP2O75791 330 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 SHBGP04278 402 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 GHRP10912 638 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 MLH1P40692 756 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 PPP2R2AP63151 447 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 MORF4L2Q15014 288 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 TRNP1Q6NT89 227 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 ANKRD33Q7Z3H0 272 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 SCUBE3Q8IX30 993 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 SLC2A14Q8TDB8 520 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.67■■□□□ 1.38
CCDC47-204ENST00000582252 FAM172AQ8WUF8 416 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 PIWIL1Q96J94 861 aaKnown RBP23.67■■□□□ 1.38
CCDC47-204ENST00000582252 CFAP57Q96MR6 1250 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 PEBP4Q96S96 227 aa23.67■■□□□ 1.38
CCDC47-204ENST00000582252 HNRNPABQ99729 332 aaKnown RBP23.67■■□□□ 1.38
CCDC47-204ENST00000582252 NGRNQ9NPE2 291 aaKnown RBP23.67■■□□□ 1.38
CCDC47-204ENST00000582252 PQBP1O60828 265 aaKnown RBP23.66■■□□□ 1.38
CCDC47-204ENST00000582252 TTC4O95801 387 aa23.66■■□□□ 1.38
CCDC47-204ENST00000582252 HPDP32754 393 aaPredicted RBP23.66■■□□□ 1.38
CCDC47-204ENST00000582252 RPL9P32969 192 aaKnown RBP23.66■■□□□ 1.38
CCDC47-204ENST00000582252 CHKAP35790 457 aa23.66■■□□□ 1.38
CCDC47-204ENST00000582252 ATN1P54259 1190 aaPredicted RBP23.66■■□□□ 1.38
CCDC47-204ENST00000582252 GPS1Q13098 491 aa23.66■■□□□ 1.38
CCDC47-204ENST00000582252 LPIN1Q14693 890 aa23.66■■□□□ 1.38
CCDC47-204ENST00000582252 EFHC1Q5JVL4 640 aa23.66■■□□□ 1.38
CCDC47-204ENST00000582252 MRPL10Q7Z7H8 261 aaKnown RBP23.66■■□□□ 1.38
CCDC47-204ENST00000582252 RSAD2Q8WXG1 361 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms