RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 ZDHHC11BP0C7U3 371 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 IRF1P10914 325 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 MBL2P11226 248 aaPredicted RBP13.3□□□□□ -0.28
CBX1-206ENST00000581003 RPS9P46781 194 aaKnown RBP13.3□□□□□ -0.28
CBX1-206ENST00000581003 PLCB2Q00722 1185 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 MESP2Q0VG99 397 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 CCINQ13939 588 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 GOLGA7BQ2TAP0 167 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 GAB4Q2WGN9 574 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 DPCR1Q3MIW9 517 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 CC2D1AQ6P1N0 951 aaPredicted RBP13.3□□□□□ -0.28
CBX1-206ENST00000581003 TTC30AQ86WT1 665 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 RALGPS2Q86X27 583 aaPredicted RBP13.3□□□□□ -0.28
CBX1-206ENST00000581003 SFTPA1Q8IWL2 248 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 CCDC150Q8NCX0 1101 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 TMEM176AQ96HP8 235 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 HEXIM2Q96MH2 286 aaKnown RBP13.3□□□□□ -0.28
CBX1-206ENST00000581003 ZSWIM1Q9BR11 485 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 CHRDQ9H2X0 955 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 C8orf33Q9H7E9 229 aaPredicted RBP13.3□□□□□ -0.28
CBX1-206ENST00000581003 LMBRD1Q9NUN5 540 aa13.3□□□□□ -0.28
CBX1-206ENST00000581003 MRPS17Q9Y2R5 130 aaKnown RBP13.3□□□□□ -0.28
CBX1-206ENST00000581003 A0A1W2PQH9 124 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 PRR23AA6NEV1 266 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 SOBPA7XYQ1 873 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 RNF225M0QZC1 329 aaPredicted RBP13.29□□□□□ -0.28
CBX1-206ENST00000581003 LAMTOR5O43504 91 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 GFRA3O60609 400 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 EGFP01133 1207 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 TDGF1P13385 188 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 ACO1P21399 889 aaKnown RBP13.29□□□□□ -0.28
CBX1-206ENST00000581003 GJA4P35212 333 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 IFNAR2P48551 515 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 SLC7A9P82251 487 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 HSP90AA4PQ58FG1 418 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 RRAGAQ7L523 313 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 SCD5Q86SK9 330 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 IRF2BP1Q8IU81 584 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 TFAP2BQ92481 460 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 NDRG1Q92597 394 aaKnown RBP13.29□□□□□ -0.28
CBX1-206ENST00000581003 NELL2Q99435 816 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 ECT2Q9H8V3 914 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 METTL14Q9HCE5 456 aaKnown RBP13.29□□□□□ -0.28
CBX1-206ENST00000581003 PRMT8Q9NR22 394 aaPredicted RBP13.29□□□□□ -0.28
CBX1-206ENST00000581003 ZMYM5Q9UJ78 669 aa13.29□□□□□ -0.28
CBX1-206ENST00000581003 BICDL2A1A5D9 508 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 PROB1E7EW31 1015 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 CYP17A1P05093 508 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 PPP1R2P41236 205 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 KCNH2Q12809 1159 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 PDGFRLQ15198 375 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 TMEM196Q5HYL7 178 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 HECTD3Q5T447 861 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 GJB7Q6PEY0 223 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 C12orf40Q86WS4 652 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 TRIML1Q8N9V2 468 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 GPT2Q8TD30 523 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 CNOT6LQ96LI5 555 aaKnown RBP13.28□□□□□ -0.28
CBX1-206ENST00000581003 KREMEN1Q96MU8 473 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 DUSP16Q9BY84 665 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 GTPBP4Q9BZE4 634 aaKnown RBP13.28□□□□□ -0.28
CBX1-206ENST00000581003 INTS2Q9H0H0 1204 aaKnown RBP13.28□□□□□ -0.28
CBX1-206ENST00000581003 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 RWDD2AQ9UIY3 292 aa13.28□□□□□ -0.28
CBX1-206ENST00000581003 CACNA1HO95180 2353 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 NCAM2O15394 837 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 GREM1O60565 184 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 TLR5O60602 858 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 GABBR2O75899 941 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 CD19P15391 556 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 TCF3P15923 654 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 SLC6A11P48066 632 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 GALK1P51570 392 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 KIF11P52732 1056 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 MLLT6P55198 1093 aaPredicted RBP13.27□□□□□ -0.29
CBX1-206ENST00000581003 MARSP56192 900 aaKnown RBP13.27□□□□□ -0.29
CBX1-206ENST00000581003 SNX30Q5VWJ9 437 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 ARHGAP17Q68EM7 881 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 FOXR2Q6PJQ5 311 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 TMEM270Q6UE05 265 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 BHLHA9Q7RTU4 235 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 PIGZQ86VD9 579 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 CREBRFQ8IUR6 639 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 PPM1KQ8N3J5 372 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 CPA6Q8N4T0 437 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 PDZD8Q8NEN9 1154 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 UBA3Q8TBC4 463 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 OVCA2Q8WZ82 227 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 ATP2A3Q93084 1043 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 P2RY11Q96G91 374 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 CRACR2AQ9BSW2 395 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 NUP62CLQ9H1M0 184 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 AJAP1Q9UKB5 411 aaPredicted RBP13.27□□□□□ -0.29
CBX1-206ENST00000581003 TSPAN16Q9UKR8 245 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 SCML2Q9UQR0 700 aa13.27□□□□□ -0.29
CBX1-206ENST00000581003 K7ESF4 209 aa13.26□□□□□ -0.29
CBX1-206ENST00000581003 O00370 1275 aa13.26□□□□□ -0.29
CBX1-206ENST00000581003 PIK3R2O00459 728 aa13.26□□□□□ -0.29
CBX1-206ENST00000581003 RNF40O75150 1001 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms