RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ZNF707Q96C28 371 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-203ENST00000580986 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 BAG1Q99933 345 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-203ENST00000580986 TRIM62Q9BVG3 475 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 NHEJ1Q9H9Q4 299 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-203ENST00000580986 ADAMTS1Q9UHI8 967 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 NAGPAQ9UK23 515 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 SCML2Q9UQR0 700 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
CCDC47-203ENST00000580986 ZNF638Q14966 1978 aaKnown RBP10.96□□□□□ -0.66
CCDC47-203ENST00000580986 EYSQ5T1H1 3165 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 A0A087X0T9 212 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.95□□□□□ -0.66
CCDC47-203ENST00000580986 SLC38A8A6NNN8 435 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 NRDCO43847 1150 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 RTN2O75298 545 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 TBX10O75333 385 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 CALCAP01258 141 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 GLI1P08151 1106 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 FAM228BP0C875 321 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 SKILP12757 684 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 HMGA1P17096 107 aaKnown RBP10.95□□□□□ -0.66
CCDC47-203ENST00000580986 PFKLP17858 780 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 GTF2F1P35269 517 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCDC47-203ENST00000580986 CYLC1P35663 651 aaPredicted RBP10.95□□□□□ -0.66
CCDC47-203ENST00000580986 LTBRP36941 435 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 NSFP46459 744 aaKnown RBP10.95□□□□□ -0.66
CCDC47-203ENST00000580986 TUBP50607 506 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 DDR2Q16832 855 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 PTPN20Q4JDL3 420 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 PABPC1LQ4VXU2 614 aaKnown RBP10.95□□□□□ -0.66
CCDC47-203ENST00000580986 TAF3Q5VWG9 929 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 ACAD10Q6JQN1 1059 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 SYCE2Q6PIF2 218 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 MON1BQ7L1V2 547 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 ARCQ7LC44 396 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 DNAJB7Q7Z6W7 309 aaPredicted RBP10.95□□□□□ -0.66
CCDC47-203ENST00000580986 GPR149Q86SP6 731 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 TMC8Q8IU68 726 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 LRRC8AQ8IWT6 810 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 ARHGAP18Q8N392 663 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 SMRP1Q8NCR6 262 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 UBA3Q8TBC4 463 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 TRIM11Q96F44 468 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 PPP1R13BQ96KQ4 1090 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 CCDC42Q96M95 316 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 ZNF512Q96ME7 567 aaPredicted RBP10.95□□□□□ -0.66
CCDC47-203ENST00000580986 SLITRK1Q96PX8 696 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 CPXM1Q96SM3 734 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 PCDHB18PQ96TA0 734 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 CHP1Q99653 195 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 LRRC3Q9BY71 257 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 ADAM7Q9H2U9 754 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 DEF6Q9H4E7 631 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 LRRC4Q9HBW1 653 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 ASNSD1Q9NWL6 643 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 CLEC1BQ9P126 229 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 WDR35Q9P2L0 1181 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 CYTH4Q9UIA0 394 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 INTUQ9ULD6 942 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 COG5Q9UP83 839 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 DENND4AQ7Z401 1863 aa10.95□□□□□ -0.66
CCDC47-203ENST00000580986 DENND4CQ5VZ89 1909 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 OBSL1O75147 1896 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 MYO16Q9Y6X6 1858 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 XIRP2A4UGR9 3374 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 CCDC195A0A1B0GUA6 201 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 EIF3CLB5ME19 914 aaKnown RBP10.94□□□□□ -0.66
CCDC47-203ENST00000580986 E5RJQ4 531 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 TULP2O00295 520 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 ZNF197O14709 1029 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 LINC01565O15544 149 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 ARHGAP6O43182 974 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 RFPL2O75678 378 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 SOAT2O75908 522 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 ZBED1O96006 694 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 CALB1P05937 261 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 PLEKP08567 350 aaPredicted RBP10.94□□□□□ -0.66
CCDC47-203ENST00000580986 ZDHHC11BP0C7U3 371 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 SPATA31D3P0C874 917 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 MYBL1P10243 752 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 PTPN2P17706 415 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 YWHAQP27348 245 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 CDC25CP30307 473 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 EIF4A3P38919 411 aaKnown RBP10.94□□□□□ -0.66
CCDC47-203ENST00000580986 TKTL1P51854 596 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 PTP4A2Q12974 167 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 ZNF268Q14587 947 aaPredicted RBP10.94□□□□□ -0.66
CCDC47-203ENST00000580986 NAA35Q5VZE5 725 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 LLGL2Q6P1M3 1020 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 ALKBH5Q6P6C2 394 aaKnown RBP10.94□□□□□ -0.66
CCDC47-203ENST00000580986 SPATA31D4Q6ZUB0 917 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 TOGARAM2Q6ZUX3 1019 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 MON1AQ86VX9 555 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 ERICH1Q86X53 443 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 PASD1Q8IV76 773 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 SIX6OS1Q8N1H7 587 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 C18orf8Q96DM3 657 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 NECTIN4Q96NY8 510 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms