RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 ZNF852Q6ZMS4 543 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 TADA2BQ86TJ2 420 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 GPIHBP1Q8IV16 184 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 ARHGAP18Q8N392 663 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 ZNF276Q8N554 614 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 RBBP8NLQ8NC74 664 aaPredicted RBP17.32■□□□□ 0.36
IFT20-210ENST00000580357 FLCNQ8NFG4 579 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 RSPRY1Q96DX4 576 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 KREMEN1Q96MU8 473 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 BPIFA3Q9BQP9 254 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 GKN1Q9NS71 199 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 FANCLQ9NW38 375 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 TSPAN16Q9UKR8 245 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 USP3Q9Y6I4 520 aa17.32■□□□□ 0.36
IFT20-210ENST00000580357 KANSL1LA0AUZ9 987 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 LRRC10BA6NIK2 292 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 RNF225M0QZC1 329 aaPredicted RBP17.31■□□□□ 0.36
IFT20-210ENST00000580357 O00370 1275 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 OLFM2O95897 454 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 KRT5P13647 590 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 AOC1P19801 751 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 AMPD2Q01433 879 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 PDGFRLQ15198 375 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 HSP90AA4PQ58FG1 418 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 RAB41Q5JT25 222 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 C11orf57Q6ZUT1 292 aaPredicted RBP17.31■□□□□ 0.36
IFT20-210ENST00000580357 CCDC186Q7Z3E2 898 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 KAT5Q92993 513 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 LRRC3BQ96PB8 259 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 CDK5RAP1Q96SZ6 601 aaKnown RBP17.31■□□□□ 0.36
IFT20-210ENST00000580357 DDX23Q9BUQ8 820 aaKnown RBP17.31■□□□□ 0.36
IFT20-210ENST00000580357 SMG9Q9H0W8 520 aaKnown RBP17.31■□□□□ 0.36
IFT20-210ENST00000580357 TBC1D17Q9HA65 648 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 SIT1Q9Y3P8 196 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 DENND4CQ5VZ89 1909 aa17.31■□□□□ 0.36
IFT20-210ENST00000580357 PDGFBP01127 241 aaPredicted RBP17.3■□□□□ 0.36
IFT20-210ENST00000580357 KPNA1P52294 538 aaPredicted RBP17.3■□□□□ 0.36
IFT20-210ENST00000580357 ZNF132P52740 706 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 BPIFB4P59827 614 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 NR1H3Q13133 447 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 MEA1Q16626 185 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 GOLGA7BQ2TAP0 167 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 FKBP15Q5T1M5 1219 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 SH3RF2Q8TEC5 729 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 KCTD13Q8WZ19 329 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 EXOC4Q96A65 974 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 SLC22A12Q96S37 553 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 FAM83CQ9BQN1 747 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 RNF38Q9H0F5 515 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 HEBP1Q9NRV9 189 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 GMIPQ9P107 970 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 CCL26Q9Y258 94 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 DAAM1Q9Y4D1 1078 aa17.3■□□□□ 0.36
IFT20-210ENST00000580357 ARNTLO00327 626 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 SLC9A3R1O14745 358 aaPredicted RBP17.29■□□□□ 0.36
IFT20-210ENST00000580357 MBL2P11226 248 aaPredicted RBP17.29■□□□□ 0.36
IFT20-210ENST00000580357 RALAP11233 206 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 ATP5C1P36542 298 aaKnown RBP17.29■□□□□ 0.36
IFT20-210ENST00000580357 MAGEA9P43362 315 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 PLA2G4AP47712 749 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 PDE4CQ08493 712 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 MTF1Q14872 753 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 ITPRIPL2Q3MIP1 535 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 PM20D1Q6GTS8 502 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 KLHDC10Q6PID8 442 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 TPRG1Q6ZUI0 275 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 PIGZQ86VD9 579 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 TTC30AQ86WT1 665 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 RALGPS2Q86X27 583 aaPredicted RBP17.29■□□□□ 0.36
IFT20-210ENST00000580357 SCML4Q8N228 414 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 SHC3Q92529 594 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 HSFY1Q96LI6 401 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 NACA2Q9H009 215 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 IRF2BPLQ9H1B7 796 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 VPS16Q9H269 839 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 LRRC4Q9HBW1 653 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 CLIC5Q9NZA1 410 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 LIMA1Q9UHB6 759 aaKnown RBP17.29■□□□□ 0.36
IFT20-210ENST00000580357 DNAJC12Q9UKB3 198 aa17.29■□□□□ 0.36
IFT20-210ENST00000580357 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.29■□□□□ 0.36
IFT20-210ENST00000580357 NUP210Q8TEM1 1887 aaPredicted RBP17.29■□□□□ 0.36
IFT20-210ENST00000580357 MYH10P35580 1976 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 LEFTY2O00292 366 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 COCHO43405 550 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 CAVIN2O95810 425 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 ZBED1O96006 694 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 IFNAR2P48551 515 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 TKTL1P51854 596 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 PTK2Q05397 1052 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 GOLGA8FQ08AF8 430 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 GOLGA8DPQ0D2H9 430 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 USP4Q13107 963 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 RUNX3Q13761 415 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 KRT31Q15323 416 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 ZNF77Q15935 545 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 ARHGAP44Q17R89 818 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 ANO6Q4KMQ2 910 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 PKDCCQ504Y2 493 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 KLHDC7AQ5VTJ3 777 aa17.28■□□□□ 0.36
IFT20-210ENST00000580357 GPRIN1Q7Z2K8 1008 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms