RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 CFAP46Q8IYW2 2715 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 HELZP42694 1942 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 A0A1B0GVT2 93 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 E9PAM4 449 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 KCNK3O14649 394 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 BCAT2O15382 392 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 MBL2P11226 248 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 GUCY2CP25092 1073 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 SLC7A9P82251 487 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 MYL7Q01449 175 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 C6orf118Q5T5N4 469 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 DCAF12L1Q5VU92 463 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 DBX2Q6ZNG2 339 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 NSUN7Q8NE18 718 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 KCNV2Q8TDN2 545 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 DNASE2BQ8WZ79 361 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 MRGPRX1Q96LB2 322 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CCSER1Q9C0I3 900 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 GMIPQ9P107 970 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 L1RE1Q9UN81 338 aa14.1□□□□□ -0.15
CDK5RAP3-213ENST00000579605 A0A0B4J269 797 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 JAK2O60674 1132 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 HUS1O60921 280 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ATP2C2O75185 946 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 GRIK1P39086 918 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CSNK1EP49674 416 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CCDC173Q0VFZ6 552 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TTC38Q5R3I4 469 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 KRT79Q5XKE5 535 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 OSTM1Q86WC4 334 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TERB1Q8NA31 727 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 BAP1Q92560 729 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 PLIN2Q99541 437 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TIPINQ9BVW5 301 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 EIF2B4Q9UI10 523 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 PCDHGB2Q9Y5G2 931 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 DENND4CQ5VZ89 1909 aa14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 GOLGA4Q13439 2230 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ZNF840PA6NDX5 716 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 WASH3PC4AMC7 463 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 BDNFP23560 247 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 NEK4P51957 841 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 IFRD2Q12894 506 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PTPRNQ16849 979 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 CFAP221Q4G0U5 840 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PREPLQ4J6C6 727 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 DENND5BQ6ZUT9 1274 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TMPRSS12Q86WS5 348 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TMEM25Q86YD3 366 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ETFBKMTQ8IXQ9 262 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ZNF560Q96MR9 790 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PKMYT1Q99640 499 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ASB7Q9H672 318 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 CD248Q9HCU0 757 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 WSB2Q9NYS7 404 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TBC1D14Q9P2M4 693 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 MAGEC2Q9UBF1 373 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 AGAP1Q9UPQ3 857 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 C2CD2Q9Y426 696 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PCDHB6Q9Y5E3 794 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SNX11Q9Y5W9 270 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TSC2P49815 1807 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 OBSL1O75147 1896 aa14.08□□□□□ -0.16
CDK5RAP3-213ENST00000579605 CEP192Q8TEP8 1941 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PLXND1Q9Y4D7 1925 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 H0YCG3 227 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 EIF5BO60841 1220 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PFKLP17858 780 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ANXA13P27216 316 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 POLR2BP30876 1174 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 GRK6P43250 576 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 NCKAP1LP55160 1127 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PSMC1P62191 440 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 IL9RQ01113 521 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SF3A1Q15459 793 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 KIF19Q2TAC6 998 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ADALQ6DHV7 355 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 GRAMD4Q6IC98 578 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SLC39A4Q6P5W5 647 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 FMNL3Q8IVF7 1028 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 C4orf32Q8N8J7 132 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SCFD1Q8WVM8 642 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SNX19Q92543 992 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SEMA4CQ9C0C4 833 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 DNAJC17Q9NVM6 304 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 LARSQ9P2J5 1176 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SH3BP1Q9Y3L3 701 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 STARD13Q9Y3M8 1113 aa14.07□□□□□ -0.16
CDK5RAP3-213ENST00000579605 MYO18BQ8IUG5 2567 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 E2F8A0AVK6 867 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 METTL12A8MUP2 240 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 KCNJ18B7U540 433 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 B8ZZF3 427 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TISP43B9A030 160 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ANKRD63C9JTQ0 380 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 K7ENM7 598 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ERVH48-1M5A8F1 160 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 HOXC11O43248 304 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 WISP1O95388 367 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms