RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 CUTAO60888 179 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 GABBR2O75899 941 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 RTN3O95197 1032 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 ABL1P00519 1130 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 ZDHHC11BP0C7U3 371 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 GRIA2P42262 883 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 CDH8P55286 799 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 TNNC1P63316 161 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 IRX4P78413 519 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 DDX42Q86XP3 938 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 NELFCDQ8IXH7 590 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 ETFBKMTQ8IXQ9 262 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 ALLCQ8N6M5 410 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 TXNDC5Q8NBS9 432 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 SCAMP5Q8TAC9 235 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 TMEM174Q8WUU8 243 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 SLITRK1Q96PX8 696 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 TBC1D14Q9P2M4 693 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 CGNQ9P2M7 1197 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 NXF1Q9UBU9 619 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 MBD1Q9UIS9 605 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 HCN2Q9UL51 889 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 GREB1Q4ZG55 1949 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 ZZEF1O43149 2961 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 SPAG17Q6Q759 2223 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 OBSL1O75147 1896 aa11.32□□□□□ -0.6
CSNK1D-210ENST00000579308 PVALEFA0A1B0GWK0 134 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 HOXC11O43248 304 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 GREM1O60565 184 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 ALDH1A2O94788 518 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 YEATS4O95619 227 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 ADH1CP00326 375 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 C4BPAP04003 597 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 APODP05090 189 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 MBL2P11226 248 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 ADH5P11766 374 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 CASP1P29466 404 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 TIE1P35590 1138 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 CASP4P49662 377 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 PGFP49763 221 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 TUBP50607 506 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 NOVA1P51513 510 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 TRPC3Q13507 836 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 KNOP1Q1ED39 458 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 MAP7D1Q3KQU3 841 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 SPDYCQ5MJ68 293 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 LY6G5CQ5SRR4 150 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 HECTD3Q5T447 861 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 DAB2IPQ5VWQ8 1189 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 ABCA7Q8IZY2 2146 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 FRMD1Q8N878 549 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 PDZD8Q8NEN9 1154 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 RLN3Q8WXF3 142 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 WBP2Q969T9 261 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 SYAP1Q96A49 352 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 OTUB2Q96DC9 234 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 ZNF396Q96N95 335 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 SMYD3Q9H7B4 428 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 MAGEF1Q9HAY2 307 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 ARHGEF4Q9NR80 690 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 COMMD8Q9NX08 183 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 EVLQ9UI08 416 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 TCHHQ07283 1943 aa11.31□□□□□ -0.6
CSNK1D-210ENST00000579308 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 POLR2DO15514 142 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 VNN1O95497 513 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 PROS1P07225 676 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 CEACAM1P13688 526 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 CSRP1P21291 193 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 PTGER3P43115 390 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 GAD2Q05329 585 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 EOGTQ5NDL2 527 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 SH3PXD2AQ5TCZ1 1133 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 LPCAT2Q7L5N7 544 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 CYP2U1Q7Z449 544 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 FAM35AQ86V20 835 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 FUKQ8N0W3 1084 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 CRYBG2Q8N1P7 616 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 ZMIZ2Q8NF64 920 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 PARD3BQ8TEW8 1205 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 WHAMMQ8TF30 809 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 FBXO32Q969P5 355 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 SDCBP2Q9H190 292 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 BLZF1Q9H2G9 400 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 CCSER2Q9H7U1 834 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 CD248Q9HCU0 757 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 SLC39A2Q9NP94 309 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 TMEM9BQ9NQ34 198 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 TMEM74BQ9NUR3 256 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 STARD13Q9Y3M8 1113 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 WDFY3Q8IZQ1 3526 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 EML5Q05BV3 1969 aa11.3□□□□□ -0.6
CSNK1D-210ENST00000579308 ANAPC1Q9H1A4 1944 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 TBC1D3BA6NDS4 549 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 LRRIQ3A6PVS8 624 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms