RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ATP5C1P36542 298 aaKnown RBP6.91□□□□□ -1.3
TRAF4-213ENST00000578917 SOX9P48436 509 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 TKTL1P51854 596 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 MLLT6P55198 1093 aaPredicted RBP6.91□□□□□ -1.3
TRAF4-213ENST00000578917 MARSP56192 900 aaKnown RBP6.91□□□□□ -1.3
TRAF4-213ENST00000578917 GCNT1Q02742 428 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 GRSF1Q12849 480 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRAF4-213ENST00000578917 LRRC32Q14392 662 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 KCNJ12Q14500 433 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 PPP2R5DQ14738 602 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 ANGPT1Q15389 498 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 ARHGAP44Q17R89 818 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 CCDC183Q5T5S1 534 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 CWF19L1Q69YN2 538 aaKnown RBP6.91□□□□□ -1.3
TRAF4-213ENST00000578917 TRIM68Q6AZZ1 485 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 CLEC20AQ6ZU45 233 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 ENOSF1Q7L5Y1 443 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 MIB1Q86YT6 1006 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 C1orf210Q8IVY1 113 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 CCDC105Q8IYK2 499 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 SIX6OS1Q8N1H7 587 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 ARHGAP18Q8N392 663 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 RBBP8NLQ8NC74 664 aaPredicted RBP6.91□□□□□ -1.3
TRAF4-213ENST00000578917 UBA3Q8TBC4 463 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 OSCP1Q8WVF1 389 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 GOLGA1Q92805 767 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 ATP2A3Q93084 1043 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 MSANTD3Q96H12 275 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 FAM81BQ96LP2 452 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 PCMTD1Q96MG8 357 aaPredicted RBP6.91□□□□□ -1.3
TRAF4-213ENST00000578917 TUBGCP2Q9BSJ2 902 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 OSBPL6Q9BZF3 934 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 NAT10Q9H0A0 1025 aaKnown RBP6.91□□□□□ -1.3
TRAF4-213ENST00000578917 PDCL3Q9H2J4 239 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 LINC00597Q9H2U6 94 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 NDST4Q9H3R1 872 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 CCSER2Q9H7U1 834 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 TMEM30AQ9NV96 361 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 DNMT3LQ9UJW3 386 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 TSPAN16Q9UKR8 245 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 ARHGAP26Q9UNA1 814 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 SCML2Q9UQR0 700 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 SH3BP1Q9Y3L3 701 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 NFE2L3Q9Y4A8 694 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 WNT6Q9Y6F9 365 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 TCHHQ07283 1943 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 WDFY4Q6ZS81 3184 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 A0A1W2PQH9 124 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 CYP26A1O43174 497 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 THAP12O43422 761 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 MED7O43513 233 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 TLR5O60602 858 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 TADA3O75528 432 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 LETM1O95202 739 aaPredicted RBP6.9□□□□□ -1.3
TRAF4-213ENST00000578917 NFATC1O95644 943 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 TBX18O95935 607 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 ZBED1O96006 694 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 RARGP13631 454 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 LCP1P13796 627 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 ARSAP15289 507 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 SLC9A1P19634 815 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 MAGEA9P43362 315 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 PSEN1P49768 467 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 KIF11P52732 1056 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 BCAT1P54687 386 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 SLC7A9P82251 487 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 CSTF1Q05048 431 aaKnown RBP6.9□□□□□ -1.3
TRAF4-213ENST00000578917 PDE4CQ08493 712 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 BST2Q10589 180 aaKnown RBP6.9□□□□□ -1.3
TRAF4-213ENST00000578917 PON2Q15165 354 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 STILQ15468 1287 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 CNGA2Q16280 664 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 STX1AQ16623 288 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 MAN2A1Q16706 1144 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 VWA3BQ502W6 1294 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 FKBP15Q5T1M5 1219 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 BTBD8Q5XKL5 378 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 ARHGAP17Q68EM7 881 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 GPRIN1Q7Z2K8 1008 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 PIGZQ86VD9 579 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 IRF2BP1Q8IU81 584 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 ARHGEF19Q8IW93 802 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 ZMIZ2Q8NF64 920 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 PRSS33Q8NF86 280 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 RNF139Q8WU17 664 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 KAT5Q92993 513 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 CDK5RAP1Q96SZ6 601 aaKnown RBP6.9□□□□□ -1.3
TRAF4-213ENST00000578917 FAM83CQ9BQN1 747 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 DDX23Q9BUQ8 820 aaKnown RBP6.9□□□□□ -1.3
TRAF4-213ENST00000578917 UBXN6Q9BZV1 441 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 PNPLA8Q9NP80 782 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 ST7Q9NRC1 585 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 SAMSN1Q9NSI8 373 aaKnown RBP6.9□□□□□ -1.3
TRAF4-213ENST00000578917 IL37Q9NZH6 218 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 TBC1D14Q9P2M4 693 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 LSM7Q9UK45 103 aaKnown RBP6.9□□□□□ -1.3
TRAF4-213ENST00000578917 STRIP2Q9ULQ0 834 aa6.9□□□□□ -1.3
TRAF4-213ENST00000578917 MTCL1Q9Y4B5 1905 aaKnown RBP6.89□□□□□ -1.31
TRAF4-213ENST00000578917 F5P12259 2224 aa6.89□□□□□ -1.31
TRAF4-213ENST00000578917 E2F8A0AVK6 867 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms