RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 OSBPL8Q9BZF1 889 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 RAB17Q9H0T7 212 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 EPB41L5Q9HCM4 733 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 GDF3Q9NR23 364 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 RASAL2Q9UJF2 1139 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 PCDHB8Q9UN66 801 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 MTCH2Q9Y6C9 303 aa17.77■□□□□ 0.44
SREBF1-218ENST00000578469 TDRD15B5MCY1 1934 aaKnown RBP17.76■□□□□ 0.43
SREBF1-218ENST00000578469 XIRP2A4UGR9 3374 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 C2CD4BA6NLJ0 364 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 TMEM189-UBE2V1I3L0A0 370 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 DPYSL4O14531 572 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 PAPSS1O43252 624 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-218ENST00000578469 TRAPPC3O43617 180 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 SEC31AO94979 1220 aaKnown RBP17.76■□□□□ 0.43
SREBF1-218ENST00000578469 RARAP10276 462 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 LCP1P13796 627 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 POU3F3P20264 500 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-218ENST00000578469 TKTP29401 623 aaKnown RBP17.76■□□□□ 0.43
SREBF1-218ENST00000578469 SDC4P31431 198 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 PCK1P35558 622 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 KCNQ1P51787 676 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 DR1Q01658 176 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 DSC1Q08554 894 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 MAPRE1Q15691 268 aaKnown RBP17.76■□□□□ 0.43
SREBF1-218ENST00000578469 CYP1B1Q16678 543 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 PAN2Q504Q3 1202 aaKnown RBP17.76■□□□□ 0.43
SREBF1-218ENST00000578469 EFHC1Q5JVL4 640 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 BEND6Q5SZJ8 279 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-218ENST00000578469 ARCQ7LC44 396 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 HDXQ7Z353 690 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 SCUBE3Q8IX30 993 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 PRELID2Q8N945 189 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 KCTD13Q8WZ19 329 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 RNF25Q96BH1 459 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-218ENST00000578469 B3GNT5Q9BYG0 378 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 LRRC4Q9HBW1 653 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 CRTAC1Q9NQ79 661 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 TBC1D13Q9NVG8 400 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 AMACRQ9UHK6 382 aa17.76■□□□□ 0.43
SREBF1-218ENST00000578469 UTP11Q9Y3A2 253 aaKnown RBP17.76■□□□□ 0.43
SREBF1-218ENST00000578469 I3L4J1 428 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 LRCH4O75427 683 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 GLI1P08151 1106 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 OR1G1P47890 313 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 FNTAP49354 379 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 TSPY1Q01534 308 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 GPNMBQ14956 572 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 OVOS1Q6IE37 1185 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 CD300LGQ6UXG3 332 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 SLC26A9Q7LBE3 791 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 PIGZQ86VD9 579 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 COLGALT2Q8IYK4 626 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 EIF1ADQ8N9N8 165 aaKnown RBP17.75■□□□□ 0.43
SREBF1-218ENST00000578469 C12orf50Q8NA57 414 aaPredicted RBP17.75■□□□□ 0.43
SREBF1-218ENST00000578469 HASPINQ8TF76 798 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 ARNTL2Q8WYA1 636 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.75■□□□□ 0.436e-11■■■■■ 88.3
SREBF1-218ENST00000578469 CERS4Q9HA82 394 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 ZNF446Q9NWS9 450 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 NR2E1Q9Y466 385 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 TANC1Q9C0D5 1861 aa17.75■□□□□ 0.43
SREBF1-218ENST00000578469 MYBPHLA2RUH7 354 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 CLDN5O00501 218 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 AP1G2O75843 785 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 BAIAP3O94812 1187 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 DDHD2O94830 711 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 TJP3O95049 919 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 CXCL10P02778 98 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 RALAP11233 206 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 PTPN7P35236 360 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 COILP38432 576 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-218ENST00000578469 SLC25A11Q02978 314 aaKnown RBP17.74■□□□□ 0.43
SREBF1-218ENST00000578469 CUL1Q13616 776 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 INTS6LQ5JSJ4 861 aaKnown RBP17.74■□□□□ 0.43
SREBF1-218ENST00000578469 KIAA0319Q5VV43 1072 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 SPOCD1Q6ZMY3 1216 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 PAQR9Q6ZVX9 377 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 FAM35AQ86V20 835 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 ZNF280BQ86YH2 543 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 SIX6OS1Q8N1H7 587 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 IFT81Q8WYA0 676 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 SMARCD1Q96GM5 515 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 SLITRK1Q96PX8 696 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 COLEC11Q9BWP8 271 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 MRPL9Q9BYD2 267 aaKnown RBP17.74■□□□□ 0.43
SREBF1-218ENST00000578469 UBXN6Q9BZV1 441 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 LRRC19Q9H756 370 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 ZWILCHQ9H900 591 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 KRT82Q9NSB4 513 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 PCYOX1Q9UHG3 505 aa17.74■□□□□ 0.43
SREBF1-218ENST00000578469 FEZ2Q9UHY8 353 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-218ENST00000578469 REV3LO60673 3130 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 TCRBV7S2A1N4TA0A589 114 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 LRRD1A4D1F6 860 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 TTI1O43156 1089 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 PRPSAP2O60256 369 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 TADA2AO75478 443 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 GRAP2O75791 330 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 GABBR2O75899 941 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms