RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PCIF1Q9H4Z3 704 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 DMAP1Q9NPF5 467 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■■■ 127.5
SMARCE1-214ENST00000578112 AGPAT3Q9NRZ7 376 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 CFAP97Q9P2B7 532 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 WDR35Q9P2L0 1181 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 SUSD2Q9UGT4 822 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 PILRBQ9UKJ0 227 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 SH3BP1Q9Y3L3 701 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 F8VP50 259 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 CD2BP2O95400 341 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 YEATS4O95619 227 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 USP46P62068 366 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 PSMC1P62191 440 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 EHHADHQ08426 723 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 CCDC6Q16204 474 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 E2F4Q16254 413 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 FAM26FQ5R3K3 315 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 ANO7Q6IWH7 933 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 KLHDC10Q6PID8 442 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 UNC93AQ86WB7 457 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 CBWD2Q8IUF1 395 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 IQUBQ8NA54 791 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 OR6B3Q8NGW1 331 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 ZDHHC5Q9C0B5 715 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 FAM124BQ9H5Z6 455 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 PNPLA8Q9NP80 782 aa11.93□□□□□ -0.5
SMARCE1-214ENST00000578112 MAP3K13O43283 966 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 CUTAO60888 179 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 ATP2C2O75185 946 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 SYPP08247 313 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 SERPINF2P08697 491 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 TNNI1P19237 187 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 BCKDHBP21953 392 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 SEMA3BQ13214 749 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 ZNF423Q2M1K9 1284 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 HTR3DQ70Z44 454 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 TADA2BQ86TJ2 420 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 TXNDC5Q8NBS9 432 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 GATA6Q92908 595 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 FBXO32Q969P5 355 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 FAXDC2Q96IV6 333 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 XPO6Q96QU8 1125 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 CDK5RAP1Q96SZ6 601 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 MRPL45Q9BRJ2 306 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 IKZF4Q9H2S9 585 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 DEC1Q9P2X7 70 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 ZNF510Q9Y2H8 683 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 MSRB2Q9Y3D2 182 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 PTPRJQ12913 1337 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 THADAQ6YHU6 1953 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 DCLK1O15075 740 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 C2orf27AQ580R0 203 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 TRIM61Q5EBN2 209 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 NAIF1Q69YI7 327 aaPredicted RBP11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 ATL3Q6DD88 541 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 TCEAL6Q6IPX3 200 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 SDE2Q6IQ49 451 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 TMEM92Q6UXU6 159 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 SLC9A9Q8IVB4 645 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 ALLCQ8N6M5 410 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 TCEAL3Q969E4 200 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 ZFRQ96KR1 1074 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 CLIC6Q96NY7 704 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 GABRG3Q99928 467 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 B3GNT5Q9BYG0 378 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 RNF38Q9H0F5 515 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 CSNK1G1Q9HCP0 422 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 SPHK2Q9NRA0 654 aa11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 DNAAF2Q9NVR5 837 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-214ENST00000578112 A8MXQ7 604 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 SEC13P55735 322 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 ZXDBP98169 803 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 GRAMD4Q6IC98 578 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 HDDC3Q8N4P3 179 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 TERB1Q8NA31 727 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 PIGKQ92643 395 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 TPSD1Q9BZJ3 242 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 XYLT2Q9H1B5 865 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 SMOC1Q9H4F8 434 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 MBD1Q9UIS9 605 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 LSM7Q9UK45 103 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 PCDHA5Q9Y5H7 936 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 PCDH15Q96QU1 1955 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 MYO15AQ9UKN7 3530 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 A0A1W2PQD8 194 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 SGK1O00141 431 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 MAPK13O15264 365 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 TGFB1I1O43294 461 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 CACNG3O60359 315 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 PDGFRBP09619 1106 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 HNRNPLP14866 589 aaKnown RBP eCLIP11.91□□□□□ -0.53e-11■■□□□ 13.3
SMARCE1-214ENST00000578112 SYT1P21579 422 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 NTSR1P30989 418 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 HOXC13P31276 330 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 PSEN1P49768 467 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 FAM35AQ86V20 835 aa11.91□□□□□ -0.5
SMARCE1-214ENST00000578112 CRYBG2Q8N1P7 616 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms